Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93764 | Canola | plasma membrane | 92.51 | 92.67 |
| Bra028002.1-P | Field mustard | peroxisome | 92.01 | 92.17 |
| CDY50182 | Canola | plasma membrane | 89.18 | 91.16 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 21.3 | 69.19 |
| GSMUA_Achr5P16920_001 | Banana | plasma membrane | 63.23 | 68.22 |
| GSMUA_Achr8P08410_001 | Banana | plasma membrane | 66.06 | 67.4 |
| GSMUA_Achr10P... | Banana | plasma membrane | 62.9 | 67.02 |
| GSMUA_Achr6P07370_001 | Banana | plasma membrane | 62.06 | 66.61 |
| Solyc11g042820.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 65.56 | 66.44 |
| PGSC0003DMT400082762 | Potato | plasma membrane | 49.58 | 65.93 |
| GSMUA_Achr6P29080_001 | Banana | plasma membrane | 64.56 | 65.76 |
| OQU83190 | Sorghum | plasma membrane | 61.56 | 65.37 |
| AT1G59740.1 | Thale cress | plasma membrane | 63.73 | 64.81 |
| TraesCS4B01G090800.1 | Wheat | golgi, peroxisome, plasma membrane | 64.89 | 64.57 |
| GSMUA_Achr9P08330_001 | Banana | plasma membrane | 62.4 | 64.21 |
| TraesCS4D01G087900.1 | Wheat | golgi, peroxisome, plasma membrane | 64.56 | 64.13 |
| TraesCS4A01G225400.1 | Wheat | golgi, peroxisome, plasma membrane, plastid | 64.56 | 64.03 |
| HORVU4Hr1G015640.2 | Barley | golgi, peroxisome, plasma membrane | 63.89 | 63.68 |
| Os11t0235200-01 | Rice | plasma membrane | 65.06 | 62.46 |
| Zm00001d007255_P001 | Maize | plasma membrane | 63.89 | 61.64 |
| GSMUA_Achr8P29280_001 | Banana | plasma membrane | 61.9 | 58.4 |
| VIT_18s0089g01010.t01 | Wine grape | plasma membrane | 71.88 | 47.73 |
| AT1G27040.1 | Thale cress | plasma membrane | 36.77 | 38.98 |
| AT1G69850.1 | Thale cress | plasma membrane | 37.77 | 38.8 |
| AT3G25260.1 | Thale cress | plasma membrane | 32.95 | 38.45 |
| AT2G26690.1 | Thale cress | plasma membrane | 35.94 | 37.44 |
| AT3G25280.1 | Thale cress | plasma membrane | 32.45 | 37.43 |
| AT5G62730.1 | Thale cress | plasma membrane | 35.44 | 36.16 |
| AT3G21670.1 | Thale cress | plasma membrane | 34.44 | 35.08 |
| AT1G12110.1 | Thale cress | plasma membrane | 34.11 | 34.75 |
| AT5G13400.1 | Thale cress | plasma membrane | 32.45 | 31.25 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:840237 | ProteinID:AAG51210.1 | ProteinID:AEE31595.1 | EMBL:AK221617 | ArrayExpress:AT1G33440 |
| EnsemblPlantsGene:AT1G33440 | RefSeq:AT1G33440 | TAIR:AT1G33440 | RefSeq:AT1G33440-TAIR-G | EnsemblPlants:AT1G33440.1 | TAIR:AT1G33440.1 |
| Unigene:At.49935 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:MFS_trans_sf | RefSeq:NP_174610.2 | PFAM:PF00854 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF198 |
| UniProt:Q56XQ6 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000034F43F | SEG:seg | : |
Description
NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
Coordinates
chr1:-:12127389..12130444
Molecular Weight (calculated)
66709.1 Da
IEP (calculated)
8.523
GRAVY (calculated)
0.248
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.