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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G087900.1 Wheat golgi, peroxisome, plasma membrane 98.18 98.02
TraesCS4A01G225400.1 Wheat golgi, peroxisome, plasma membrane, plastid 97.19 96.86
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 95.03 95.19
OQU83190 Sorghum plasma membrane 78.31 83.57
Os11t0235200-01 Rice plasma membrane 83.44 80.51
Zm00001d007255_P001 Maize plasma membrane 80.3 77.85
GSMUA_Achr10P... Banana plasma membrane 68.05 72.87
GSMUA_Achr6P07370_001 Banana plasma membrane 66.23 71.43
GSMUA_Achr5P16920_001 Banana plasma membrane 65.23 70.74
GSMUA_Achr9P08330_001 Banana plasma membrane 67.22 69.52
GSMUA_Achr6P29080_001 Banana plasma membrane 67.38 68.98
TraesCS2B01G326200.1 Wheat plasma membrane 66.06 68.79
GSMUA_AchrUn_... Banana plasma membrane 20.86 68.11
CDX93764 Canola plasma membrane 65.07 65.5
Bra028002.1-P Field mustard peroxisome 64.9 65.33
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 63.91 65.09
CDY50182 Canola plasma membrane 63.24 64.97
AT1G33440.1 Thale cress plasma membrane 64.57 64.89
GSMUA_Achr8P29280_001 Banana plasma membrane 65.4 62.01
PGSC0003DMT400082762 Potato plasma membrane 46.03 61.5
VIT_18s0089g01010.t01 Wine grape plasma membrane 67.72 45.19
TraesCS5B01G414000.3 Wheat plasma membrane 35.43 36.03
TraesCS4B01G371000.1 Wheat peroxisome 35.26 35.32
TraesCS2B01G368700.1 Wheat plasma membrane 32.62 35.24
TraesCS2B01G346100.1 Wheat plasma membrane 32.78 35.04
TraesCS2B01G277600.1 Wheat plasma membrane 33.28 34.84
TraesCS5B01G060500.1 Wheat plasma membrane 32.12 34.64
TraesCS1B01G225000.1 Wheat plasma membrane 34.11 34.62
TraesCS4B01G375800.1 Wheat plasma membrane 34.77 34.6
TraesCS7B01G201900.1 Wheat plasma membrane 34.44 34.49
TraesCS5B01G060800.1 Wheat plasma membrane 31.95 34.4
TraesCS1B01G224900.1 Wheat plasma membrane 33.94 34.4
TraesCS2B01G368600.2 Wheat plasma membrane 32.78 34.08
TraesCS1B01G038700.1 Wheat peroxisome 32.62 33.85
TraesCS7B01G262200.1 Wheat plasma membrane, plastid 36.26 31.74
TraesCS5B01G393100.1 Wheat plasma membrane 24.5 30.64
TraesCS3B01G095900.1 Wheat cytosol, peroxisome, plasma membrane, plastid 30.79 28.62
TraesCS2B01G368500.1 Wheat plasma membrane 25.83 28.36
TraesCS2B01G368400.1 Wheat plasma membrane 25.33 27.82
Protein Annotations
EnsemblPlants:TraesCS4B01G090800.1EnsemblPlantsGene:TraesCS4B01G090800GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF198PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixMapMan:24.2.2.9:::
Description
No Description!
Coordinates
chr4B:-:93408128..93412665
Molecular Weight (calculated)
65341.2 Da
IEP (calculated)
8.106
GRAVY (calculated)
0.358
Length
604 amino acids
Sequence
(BLAST)
001: MDVESSRQQG PKGDSNSNPM AAASEVSVDW RGRPCRPQRH GGMKAAVFVL GIQAFEIMAI AAVGNNLITY VFNEMHFPLS KSANIVTNFI GTMFLLSLLG
101: GFLSDSYLGS FWTMLIFGFV ELSGFILLAV QAHLPQLRPP ACDMKAAEQC EEVAGVKAGI FFAALYLVAL GSGCLKPNII AHGADQFRRD GEEAVDGGKR
201: LSSYFNAAYF SFCVGEMVAL TVLVWVQTRS GMDVGFGVSA AAMAVGLVSL VAGVFFYRNK PPQGSICTPI AKVFVAAVAK RKQVCPSSRA TLQGISSTGA
301: HEMRLNTTNI CSINKFRFLD KACVKAQDGG SKESGWGLCT AAEVEQVKVL LCVVPIFACT IVFNTILAQL QTFSVQQGSA MDTRLAANFH VPPASLQAIP
401: YIMLIVLVPA YEAVFVPAAR RLTGVGTGIT PLQRIGVGLF AVTFSMVAAA LVEARRRHSS VYGDGRTLSI FWIAPQFLVF GLSEMFTAVG LIEFFYKQSL
501: SGMQAFLTSM TYCSYSFGFY LSSVLVSLVN RVTSRNGGNG WLSNNDLDKD RLDLFYWLLA ALSILNFFNF LFWSRWYSNS VETVQVAGVG GDGGSEQEDE
601: KNSA
Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.