Factsheet for Bra010117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00323	Canola	plasma membrane	98.92	97.34
AT5G62730.1	Thale cress	plasma membrane	90.09	84.89
KRH03418	Soybean	plasma membrane	67.57	64.43
KRH56961	Soybean	plasma membrane	67.03	63.81
Bra012431.1-P	Field mustard	plasma membrane	28.65	62.35
GSMUA_Achr7P08880_001	Banana	plasma membrane	61.08	61.3
PGSC0003DMT400065182	Potato	plasma membrane	64.5	60.78
VIT_17s0000g05640.t01	Wine grape	cytosol, plasma membrane, plastid	66.49	60.49
Os06t0581000-01	Rice	plasma membrane	63.06	59.32
Zm00001d046383_P001	Maize	plasma membrane	63.06	59.12
EER89980	Sorghum	plasma membrane	63.78	58.8
TraesCS7A01G365100.1	Wheat	plasma membrane	61.08	57.75
Zm00001d036942_P001	Maize	plasma membrane	55.86	57.41
Zm00001d036941_P001	Maize	plasma membrane	61.98	56.49
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	61.08	56.22
TraesCS7D01G357300.2	Wheat	plasma membrane	60.9	54.69
GSMUA_Achr6P00820_001	Banana	plasma membrane	61.08	53.64
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	60.9	53.57
Solyc03g113250.2.1	Tomato	plasma membrane	58.56	53.28
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	60.9	48.99
Bra013221.1-P	Field mustard	plasma membrane	37.12	39.92
Bra013222.1-P	Field mustard	plasma membrane	36.94	39.81
Bra011937.1-P	Field mustard	plasma membrane	36.4	39.0
Bra028002.1-P	Field mustard	peroxisome	38.56	35.67
Bra027836.1-P	Field mustard	plasma membrane	37.84	34.83
Bra035429.1-P	Field mustard	plasma membrane	36.94	34.51
Bra031295.1-P	Field mustard	plasma membrane	35.14	33.39
Bra019744.1-P	Field mustard	plasma membrane	16.04	33.21
Bra023868.1-P	Field mustard	plasma membrane	34.23	32.87
Bra026991.1-P	Field mustard	plasma membrane	34.59	32.6
Bra016789.1-P	Field mustard	plasma membrane	34.23	32.2
Bra012052.1-P	Field mustard	plasma membrane	29.91	31.86
Bra023408.1-P	Field mustard	plastid	30.63	27.33

Protein Annotations

Gene3D:1.20.1250.20	MapMan:11.1.4.1	MapMan:24.2.2.9	EnsemblPlantsGene:Bra010117	EnsemblPlants:Bra010117.1	EnsemblPlants:Bra010117.1-P
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4D0W8	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF184	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000253F756	SEG:seg	:	:	:

Description

AT5G62730 (E=1e-236) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA06:+:19525630..19527847

Molecular Weight (calculated)

61148.6 Da

IEP (calculated)

8.965

GRAVY (calculated)

0.372

Length

555 amino acids

Sequence
(BLAST)

001: MDEANRLSVW NGYVDWRNRP ALRGYHGGML AASFVLVVEV LENLAFLANA SNLVLYLSTK MGFSPSGAAN AVTAFMGTAF FLALLGGFLA DAFFTTFHIY
101: LVSAAIEFLG LLVLTVQAHE HSTEPWARVV LYVGLYLVAL GVGGIKGSLP PHGAEQFDET TPTGRRQRSF FFNYFIFSLS CGALIAVTVV VWLEDNKGWS
201: YGFGVSTAAI LISVPVFLAG SRFYRLKVPS GSPITTMFKV LTAALYATFK KRTSRNVVTC HTRNECNDNI AKGNAEGDGS FLDEALRERE SLPGPLRCTE
301: EQVKDVKIVI KTLPIFMSTI MLNCCLAQLS TFSIQQASTM NTKLGSLTVP PAALPVFPVV FTMILAPTYN HLLLPLARKT TKTETGVTHL QRIGTGLVLS
401: VVAMAVAALV EMKRKLVAKE VTCCSSNNVS SSYSSPLPIT FLWIALQYVF LGSADLFTLA GMMEFFFTEA PSTMRSLATS LSWTSLAMGY YLSSVLVSAV
501: NFVTGLNQNN PWLLGKNLNE YHLERFYWLM CVLSGINFLH YLFWARRYAY RSNQN

Best Arabidopsis Sequence Match ( AT5G62730.1 )
(BLAST)

001: MSTNYTAINH ILHFHSPNSC FLMIMSLEFE QMDEANRLSA WNGYVDWRSR PALRGRHGGM LAASFVLVVE VLENLAFLAN ASNLVLYLST KMGFSPSGAA
101: NAVTAFMGTA FFLALLGGFL ADAFFTTFHI YLVSAAIEFL GLMVLTVQAH EHSTEPWSRV FLFVGLYLVA LGVGGIKGSL PPHGAEQFDE ETSSGRRQRS
201: FFFNYFIFSL SCGALIAVTV VVWLEDNKGW SYGFGVSTAA ILISVPVFLA GSRVYRLKVP SGSPITTLFK VLTAALYAKY KKRRTSRIVV TCHTRNDCDD
301: SVTKQNCDGD DGFLGSFLGE VVRERESLPR PLRCTEEQVK DVKIVIKILP IFMSTIMLNC CLAQLSTFSV QQASTMNTKL GSFTVPPAAL PVFPVVFMMI
401: LAPTYNHLLL PLARKSTKTE TGITHLQRIG TGLVLSIVAM AVAALVETKR KHVVVSCCSN NNSSSYSSSP LPITFLWVAI QYVFLGSADL FTLAGMMEFF
501: FTEAPSTMRS LATSLSWASL AMGYYFSSVL VSAVNFVTGL NHHNPWLLGE NLNQYHLERF YWLMCVLSGI NFLHYLFWAS RYVYRSNQG

Arabidopsis Description

NPF4.7Protein NRT1/ PTR FAMILY 4.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.