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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES14657 Sorghum plasma membrane 87.63 89.47
OQU81850 Sorghum plasma membrane 57.9 61.27
OQU81851 Sorghum plasma membrane 57.04 58.97
KXG26617 Sorghum plasma membrane 56.87 56.2
EES15875 Sorghum plasma membrane 48.28 49.38
EES15876 Sorghum plasma membrane 46.56 48.22
EES15877 Sorghum plasma membrane 45.7 46.5
OQU83318 Sorghum mitochondrion, plasma membrane 40.89 46.39
KXG28299 Sorghum plasma membrane 44.33 44.71
KRH51937 Soybean plasma membrane 36.43 37.06
EES12425 Sorghum plasma membrane 33.51 35.85
EER89980 Sorghum plasma membrane 36.25 35.05
KRH02511 Soybean plasma membrane 35.57 34.85
KRH19434 Soybean plasma membrane 35.22 34.75
KRG96656 Soybean plasma membrane 34.36 34.72
PGSC0003DMT400030533 Potato plasma membrane 34.71 34.71
KRH68384 Soybean plasma membrane 34.54 34.54
KRH61236 Soybean plasma membrane 36.25 34.48
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 35.57 34.39
Solyc04g079520.2.1 Tomato plasma membrane 34.19 34.19
EES12219 Sorghum plasma membrane 34.54 34.13
KRH33721 Soybean plasma membrane 35.22 33.94
PGSC0003DMT400030530 Potato mitochondrion 20.45 33.9
KRG90426 Soybean plasma membrane 34.88 33.78
OQU83190 Sorghum plasma membrane 32.65 33.57
Solyc04g079530.2.1 Tomato plasma membrane 33.33 33.51
Solyc04g079510.1.1 Tomato plasma membrane 32.82 33.45
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 34.88 33.12
PGSC0003DMT400054593 Potato plasma membrane 34.71 32.9
Solyc10g039290.1.1 Tomato plasma membrane 32.3 32.87
Solyc01g102360.1.1 Tomato plasma membrane 34.36 32.84
PGSC0003DMT400030534 Potato plasma membrane 32.65 32.48
PGSC0003DMT400011063 Potato cytosol 32.47 32.42
PGSC0003DMT400046950 Potato plasma membrane 34.02 32.41
VIT_14s0060g00220.t01 Wine grape plasma membrane 34.19 32.2
VIT_18s0001g11280.t01 Wine grape plastid 34.19 31.29
EES05323 Sorghum plasma membrane 31.44 30.65
EER91957 Sorghum plasma membrane 30.41 29.75
EES13374 Sorghum plasma membrane 29.73 28.79
OQU93471 Sorghum plasma membrane 29.9 28.76
KXG32694 Sorghum cytosol 28.18 27.94
GSMUA_Achr11P... Banana plasma membrane 29.73 26.17
EES00465 Sorghum plastid 29.55 25.79
EES19057 Sorghum plastid 7.9 18.4
Protein Annotations
MapMan:24.2.2.9EntrezGene:8082863UniProt:C5YCI8EnsemblPlants:EES11151ProteinID:EES11151ProteinID:EES11151.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF288EnsemblPlantsGene:SORBI_3006G155200SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0001A86E8ERefSeq:XP_002446823.1SEG:seg::
Description
hypothetical protein
Coordinates
chr6:+:51464195..51467058
Molecular Weight (calculated)
63494.0 Da
IEP (calculated)
7.704
GRAVY (calculated)
0.260
Length
582 amino acids
Sequence
(BLAST)
001: MACEGLVDWK GKPINTKVHG GVRAAWYLYF LIVVNFLVHV PNLQNMTTYL REVMHMGVSD ASTTLTNFIG AMCGFALLGG FLSDSYITCA RTMLLSVPLV
101: ILGYGLLTLQ SHFPWLHPAP CNPSEAAADA TSGSSSCRQV DGWRSAMLYT SLYTIALGEG VMRACIPALG SDQFDGDNPS EARQQSSFFN WFTFCLSIGS
201: VAGLILVVWL EDTRGWDIGF GLSALLILVA LLVSAAGLPL YRNRVPQGSA LTRVLQVFVV AFKNRKLQIP EKKMEETQQN SYGADSQQVP CHTPTTNNSL
301: KFLDKACVET NTGGGEGEGD GPWSVCSAAK VEETKIVLRM LPLVFSATVA HVSSSLLIAF TVQQGATTNT KLGKVHVYPA MLFIIPSIFQ TLMLVAYDRL
401: LVPLLRRRTG YTGGITQLQR VAVGFLAASV APAVAAVVER KRKDTVAAAG GHISLFWLAP QFFLIGVEDT TAFAGLLEFF TAEAPDGMKS IGVAFFWCQA
501: GMASLLGTLL VRLVNRVTHS SSAPGWLEGK DLNSSHLDLF YWVVTAVSFL GWLNYLYWAN RYKYRHDPRI STKSPDEEDS MP
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.