Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G272600.1 | Wheat | plasma membrane | 78.83 | 45.4 |
| HORVU3Hr1G071510.1 | Barley | golgi, plasma membrane | 81.11 | 43.61 |
| Zm00001d043463_P001 | Maize | plasma membrane | 65.15 | 36.56 |
| OQU87541 | Sorghum | cytosol, peroxisome, plasma membrane | 66.12 | 33.12 |
| KRH11088 | Soybean | plasma membrane | 51.47 | 26.38 |
| KRH59041 | Soybean | plasma membrane | 50.81 | 26.26 |
| PGSC0003DMT400071504 | Potato | plasma membrane | 50.81 | 26.13 |
| KRH21158 | Soybean | plasma membrane | 50.49 | 26.05 |
| KRH42929 | Soybean | plasma membrane | 51.14 | 26.04 |
| HORVU2Hr1G007730.1 | Barley | mitochondrion | 29.32 | 25.57 |
| Solyc03g005950.1.1 | Tomato | plasma membrane | 50.16 | 24.56 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 36.48 | 17.75 |
| HORVU7Hr1G071600.2 | Barley | mitochondrion | 35.83 | 17.71 |
| HORVU2Hr1G085210.21 | Barley | plasma membrane | 31.6 | 17.29 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 30.62 | 17.22 |
| HORVU2Hr1G062730.7 | Barley | plasma membrane | 31.92 | 16.95 |
| HORVU5Hr1G095020.1 | Barley | plasma membrane | 32.25 | 16.95 |
| HORVU4Hr1G015640.2 | Barley | golgi, peroxisome, plasma membrane | 32.57 | 16.58 |
| HORVU4Hr1G088020.4 | Barley | nucleus, plasma membrane | 31.6 | 15.62 |
| HORVU1Hr1G004720.4 | Barley | plasma membrane | 28.99 | 15.42 |
| HORVU1Hr1G053990.4 | Barley | peroxisome | 29.97 | 14.91 |
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 28.34 | 14.26 |
| HORVU3Hr1G014510.3 | Barley | plastid | 29.32 | 13.8 |
| HORVU2Hr1G085260.3 | Barley | plasma membrane | 13.03 | 7.8 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 14.66 | 7.67 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 1.63 | 7.25 |
| HORVU2Hr1G065480.1 | Barley | golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G098210.2 | EnsemblPlantsGene:HORVU2Hr1G098210 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF131 | PFAM:PF00854 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B462932 |
| UniProt:A0A287J3A8 | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:682236734..682238189
Molecular Weight (calculated)
34544.5 Da
IEP (calculated)
10.759
GRAVY (calculated)
0.051
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRYRIFTVQ GSSALLEIFR VYVAAIRNRN LQLPENPGEQ YEISRSKAAP EVEFVSHRDM PFRFQDRAAI VQAPTAETPS PWQQCRVKHV EHAKTVLAMV
101: PIFCSAIIMG TCLAQFQTFS IQQGSTMNTW VGSFQMQPAT LPILAVPIYE RLFVPFARGV TGHPNGIPYL QRIGVGLVLS IVSMCIVAVV EMYRKKVAVR
201: NGMLDAIHMV RPLPMSVFWL APQYGVFGIA DMFTYIGLLE FFYSQALPAH KSMSSAFLWA CMYRGVPTRK AMRVRPVAAR RTRSAAASRL PHRETGQRRQ
301: AGTSRTD
101: PIFCSAIIMG TCLAQFQTFS IQQGSTMNTW VGSFQMQPAT LPILAVPIYE RLFVPFARGV TGHPNGIPYL QRIGVGLVLS IVSMCIVAVV EMYRKKVAVR
201: NGMLDAIHMV RPLPMSVFWL APQYGVFGIA DMFTYIGLLE FFYSQALPAH KSMSSAFLWA CMYRGVPTRK AMRVRPVAAR RTRSAAASRL PHRETGQRRQ
301: AGTSRTD
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.