Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 89.78 | 33.11 |
| TraesCS5D01G419200.2 | Wheat | plasma membrane | 85.78 | 32.44 |
| TraesCS5B01G414000.3 | Wheat | plasma membrane | 84.89 | 32.15 |
| TraesCS5A01G409600.1 | Wheat | plasma membrane | 84.0 | 31.82 |
| CDY44319 | Canola | plasma membrane | 63.11 | 30.15 |
| CDY38629 | Canola | plasma membrane | 63.11 | 29.65 |
| Zm00001d016982_P001 | Maize | plasma membrane | 77.33 | 29.19 |
| EES05323 | Sorghum | plasma membrane | 76.44 | 28.81 |
| Os02t0580900-01 | Rice | plasma membrane | 77.78 | 28.74 |
| GSMUA_Achr3P05990_001 | Banana | cytosol, plasma membrane, plastid | 66.67 | 26.13 |
| Bra023868.1-P | Field mustard | plasma membrane | 63.11 | 24.57 |
| Bra031295.1-P | Field mustard | plasma membrane | 62.67 | 24.14 |
| KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 61.78 | 23.64 |
| KRH14759 | Soybean | plasma membrane | 61.33 | 23.51 |
| PGSC0003DMT400001784 | Potato | cytosol, peroxisome, plasma membrane | 61.78 | 23.44 |
| AT3G21670.1 | Thale cress | plasma membrane | 61.33 | 23.39 |
| Solyc07g049290.2.1 | Tomato | nucleus | 61.33 | 23.35 |
| Solyc12g006050.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.33 | 23.31 |
| PGSC0003DMT400010957 | Potato | cytosol, peroxisome, plasma membrane | 60.44 | 22.97 |
| VIT_12s0059g01240.t01 | Wine grape | plastid | 62.22 | 21.57 |
| HORVU1Hr1G004720.4 | Barley | plasma membrane | 47.56 | 18.54 |
| HORVU7Hr1G071600.2 | Barley | mitochondrion | 48.0 | 17.39 |
| HORVU4Hr1G088020.4 | Barley | nucleus, plasma membrane | 47.11 | 17.07 |
| HORVU1Hr1G053990.4 | Barley | peroxisome | 45.33 | 16.53 |
| HORVU3Hr1G014510.3 | Barley | plastid | 34.22 | 11.81 |
| HORVU2Hr1G085260.3 | Barley | plasma membrane | 26.67 | 11.7 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 29.78 | 11.41 |
| HORVU4Hr1G015640.2 | Barley | golgi, peroxisome, plasma membrane | 29.78 | 11.11 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 31.11 | 11.09 |
| HORVU2Hr1G062730.7 | Barley | plasma membrane | 27.56 | 10.73 |
| HORVU3Hr1G071510.1 | Barley | golgi, plasma membrane | 27.11 | 10.68 |
| HORVU2Hr1G085210.21 | Barley | plasma membrane | 25.78 | 10.34 |
| HORVU5Hr1G095020.1 | Barley | plasma membrane | 26.22 | 10.1 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 18.67 | 7.69 |
| HORVU2Hr1G007730.1 | Barley | mitochondrion | 3.56 | 2.27 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 0.44 | 1.45 |
| HORVU2Hr1G098210.2 | Barley | mitochondrion, plasma membrane | 0.0 | 0.0 |
| VIT_02s0087g00580.t01 | Wine grape | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G065480.1 | EnsemblPlantsGene:HORVU2Hr1G065480 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF154 | PFAM:PF00854 | TMHMM:TMhelix | UniParc:UPI000B46797A |
| UniProt:A0A287I8W4 | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:450072568..450073461
Molecular Weight (calculated)
24080.0 Da
IEP (calculated)
5.558
GRAVY (calculated)
0.380
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: QVSTGGHGGY NDYDDAVHFR GNPVDKSKTE VWLGAGLILG TELAELVCVM GILMNLVTYL VGELHLSNAK SANVITNFMG TLNLLAIVGG FLADAKLVRY
101: LTIAVSATIA AIGVSLLTVD TVVPTMRTPP CGDPRGAQGH EYVRASGGQL AFLYVALYVI AARAGGLKAN VSGFGSDQFD DRSPWEEHAM VFFFNRFYSC
201: ISLGSLFVVT VLVYVQDNVS NSEFK
101: LTIAVSATIA AIGVSLLTVD TVVPTMRTPP CGDPRGAQGH EYVRASGGQL AFLYVALYVI AARAGGLKAN VSGFGSDQFD DRSPWEEHAM VFFFNRFYSC
201: ISLGSLFVVT VLVYVQDNVS NSEFK
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.