Factsheet for TraesCS5A01G409600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G419200.2	Wheat	plasma membrane	93.94	93.78
TraesCS5B01G414000.3	Wheat	plasma membrane	93.6	93.6
HORVU5Hr1G099170.6	Barley	plasma membrane	92.76	90.33
HORVU2Hr1G065480.1	Barley	golgi, plasma membrane	31.82	84.0
EES05323	Sorghum	plasma membrane	79.46	79.06
Os02t0580900-01	Rice	plasma membrane	80.47	78.49
Zm00001d016982_P001	Maize	plasma membrane	77.78	77.52
TraesCS2A01G335800.1	Wheat	mitochondrion	69.7	68.43
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	64.14	66.38
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	63.64	64.29
KRH14759	Soybean	plasma membrane	63.47	64.22
Bra023868.1-P	Field mustard	plasma membrane	62.12	63.84
Bra031295.1-P	Field mustard	plasma membrane	62.46	63.53
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	62.96	63.18
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	62.46	62.67
Solyc07g049290.2.1	Tomato	nucleus	62.12	62.44
CDY44319	Canola	plasma membrane	49.49	62.42
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	62.29	62.39
AT3G21670.1	Thale cress	plasma membrane	61.95	62.37
CDY38629	Canola	plasma membrane	49.66	61.59
VIT_12s0059g01240.t01	Wine grape	plastid	63.47	58.09
VIT_02s0087g00580.t01	Wine grape	plasma membrane	27.44	55.07
TraesCS1A01G031300.1	Wheat	peroxisome	48.15	49.14
TraesCS5A01G537100.1	Wheat	peroxisome	48.65	47.45
TraesCS7A01G301700.1	Wheat	plasma membrane	48.15	47.43
TraesCS1A01G210900.1	Wheat	plasma membrane	38.55	47.41
TraesCS1A01G211000.1	Wheat	cytosol	47.31	47.23
TraesCS2A01G309100.1	Wheat	plasma membrane	35.69	36.55
TraesCS7A01G365100.1	Wheat	plasma membrane	35.19	35.6
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	35.86	35.15
TraesCS5A01G388000.1	Wheat	plasma membrane	33.67	34.36
TraesCS2A01G264500.1	Wheat	plasma membrane	33.0	33.85
TraesCS2A01G350100.1	Wheat	plasma membrane	31.14	33.09
TraesCS5A01G056100.1	Wheat	plasma membrane	26.43	33.05
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	34.01	32.11
TraesCS5A01G056200.2	Wheat	plasma membrane	30.3	32.03
TraesCS2A01G350300.1	Wheat	plasma membrane	28.45	31.83
TraesCS3A01G272600.1	Wheat	plasma membrane	28.11	31.33
TraesCS2A01G350000.1	Wheat	plasma membrane	26.09	28.65

Protein Annotations

EnsemblPlants:TraesCS5A01G409600.1	EnsemblPlantsGene:TraesCS5A01G409600	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF154	PFAM:PF00854
SEG:seg	SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr5A:-:599205318..599208552

Molecular Weight (calculated)

64040.0 Da

IEP (calculated)

8.537

GRAVY (calculated)

0.349

Length

594 amino acids

Sequence
(BLAST)

001: MVSAGGHGGY SDADDAVDFR GNPVDKSKTG GWLGAGLILG TELAERVCVM GISMNLVTYL VGELHLSNAK SATIVTNFMG TLNLLGIVGG FLADAKLGRY
101: LTIAVSATIA AAGVSLLAVD TVAPSMRPPP CVDARGAQGH ECVPASGGQL TLLYVALYVI AAGAGGLKAN VSGFGSDQFD GRNPREERAM VFFFNRFYFC
201: ISLGSLFAVT VLVYVQDNVG RGWGYGVSAA AMALGVVVLV AGTSKYRYRR PAGSPLTVIG RVLWTAWKKR KLPTPANADE LNGFHTAKVA HTDRLRCLDK
301: AAVMDQVDLA ATPKKQEQAS TSTMTEVEEV KMVVKLMPIW STCILFWTIY SQMTTFSVEQ ATHMDRRLNA GFEIPAGSLS VFLFLSILLF TSLNERFLVP
401: LAARLTGRAQ GLTSLQRVGT GLVFATVAMV VAALVEKMRR DAANGESQVA ISAFWLVPQF FIVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLVTLSM
501: GFFLSSFLVF LVHTVTRGAW IRNNLDRGRL DLFYWMLAVL GVVNFVVFVV IARQHEYKPN TSVVVAPTEG DNDTTKKETD GVLVVSENTV GMDV

Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)

001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP

Arabidopsis Description

NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.