Factsheet for TraesCS2A01G335800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G081050.1	Barley	endoplasmic reticulum, extracellular	11.07	97.1
TraesCS2D01G327000.1	Wheat	plasma membrane	90.25	96.64
TraesCS2B01G346100.1	Wheat	plasma membrane	89.42	95.75
TraesCS5A01G409600.1	Wheat	plasma membrane	68.43	69.7
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	60.33	63.59
KRH14759	Soybean	plasma membrane	58.51	60.31
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	58.51	60.2
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	58.02	59.29
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	57.69	58.95
Solyc07g049290.2.1	Tomato	nucleus	57.36	58.71
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	57.52	58.68
Bra023868.1-P	Field mustard	plasma membrane	55.7	58.3
Bra031295.1-P	Field mustard	plasma membrane	55.7	57.71
AT3G21670.1	Thale cress	plasma membrane	55.21	56.61
CDY44319	Canola	plasma membrane	43.47	55.84
CDY38629	Canola	plasma membrane	43.47	54.91
VIT_12s0059g01240.t01	Wine grape	plastid	58.18	54.24
VIT_02s0087g00580.t01	Wine grape	plasma membrane	26.12	53.38
TraesCS5A01G537100.1	Wheat	peroxisome	48.43	48.11
TraesCS7A01G301700.1	Wheat	plasma membrane	47.6	47.76
TraesCS1A01G031300.1	Wheat	peroxisome	45.29	47.08
TraesCS1A01G211000.1	Wheat	cytosol	45.95	46.72
TraesCS1A01G210900.1	Wheat	plasma membrane	37.02	46.38
Os04t0464400-00	Rice	peroxisome, plasma membrane	45.29	43.98
TraesCS7A01G365100.1	Wheat	plasma membrane	34.21	35.26
TraesCS2A01G309100.1	Wheat	plasma membrane	33.55	35.0
TraesCS3A01G272600.1	Wheat	plasma membrane	29.42	33.4
TraesCS5A01G388000.1	Wheat	plasma membrane	32.07	33.33
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	33.22	33.17
TraesCS2A01G350100.1	Wheat	plasma membrane	30.41	32.92
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	33.72	32.43
TraesCS5A01G056100.1	Wheat	plasma membrane	25.45	32.42
TraesCS5A01G056200.2	Wheat	plasma membrane	29.42	31.67
TraesCS2A01G350300.1	Wheat	plasma membrane	27.44	31.26
TraesCS2A01G264500.1	Wheat	plasma membrane	29.75	31.09
TraesCS2A01G350000.1	Wheat	plasma membrane	23.64	26.43

Protein Annotations

EnsemblPlants:TraesCS2A01G335800.1	EnsemblPlantsGene:TraesCS2A01G335800	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF154	PFAM:PF00854	SEG:seg	SUPFAM:SSF103473
TMHMM:TMhelix	MapMan:24.2.2.9	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:569901948..569906263

Molecular Weight (calculated)

65080.5 Da

IEP (calculated)

9.983

GRAVY (calculated)

0.365

Length

605 amino acids

Sequence
(BLAST)

001: MVRHSRVRIT LLHDDFAAVC ASRCSDRVGL DVIVTVRGRA QVSTGGFGDN GGCEGLVVDF KGRPVDKSRV GGWFGAGLIL VTELAERVCV MGISMNLVTY
101: LTGDMHLSSA KSANIVTNFM GTLNLLALLG GFVADAKFGR YRTIAVSATI TAVGVSLLAA STAVPGMRPP RCAAAAGYEA RRRAAGCVPA SGGQLGMLYA
201: ALYTIAAGAG GLKANVSGFG TDQFDGRDPR EERAMLYFFN RFYFCISLGS LFAVTVLVYV QDNLGRAWGY GVAAAAMAAA VAVFAAGASR YRYRRPQGSP
301: LAVIGRVLWG AWRNRRLPCP ADASELHGFR EAKVSHTDRL RCLDKAAIAE ADPATAVTVT EVEEVKMVVK LLPMWSTCIL FWTIYSQMTT FSIQQAEQMD
401: RRAGSHFVVP AGSLSVFLFL SVLLFTALNE RLLVPLAARL TRRPQGLTSL QRVAAGLVLA TLGMAVSALV EKKRRDASNG SGGVAVSALW LVPQFFLVGA
501: GEAFAYVGQL EFFIREAPER MKSMSTGLFL ATLAMGFFLS SLLVLAVDAV TRGAWIRGHL DDGRLDLFYW MLAVLGLANF AVFLVFASRH QYKRTRPDAA
601: TVEVH

Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)

001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

Arabidopsis Description

NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.