Factsheet for PGSC0003DMT400001784

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plastid 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049290.2.1	Tomato	nucleus	96.12	96.45
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	80.78	80.91
KRH14759	Soybean	plasma membrane	70.83	71.55
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	70.32	70.92
Bra023868.1-P	Field mustard	plasma membrane	65.26	66.95
Bra031295.1-P	Field mustard	plasma membrane	65.77	66.78
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	64.59	66.72
VIT_12s0059g01240.t01	Wine grape	plastid	72.68	66.41
AT3G21670.1	Thale cress	plasma membrane	65.77	66.1
CDY44319	Canola	plasma membrane	52.11	65.61
CDY38629	Canola	plasma membrane	51.94	64.3
VIT_02s0087g00580.t01	Wine grape	plasma membrane	32.04	64.19
EES05323	Sorghum	plasma membrane	64.25	63.82
Zm00001d016982_P001	Maize	plasma membrane	63.07	62.75
Os02t0580900-01	Rice	plasma membrane	64.25	62.56
TraesCS5B01G414000.3	Wheat	plasma membrane	62.56	62.46
TraesCS5A01G409600.1	Wheat	plasma membrane	62.39	62.29
TraesCS2D01G327000.1	Wheat	plasma membrane	59.19	62.12
TraesCS5D01G419200.2	Wheat	plasma membrane	62.23	62.02
TraesCS2B01G346100.1	Wheat	plasma membrane	59.02	61.95
HORVU2Hr1G065480.1	Barley	golgi, plasma membrane	23.44	61.78
HORVU5Hr1G099170.6	Barley	plasma membrane	61.55	59.84
TraesCS2A01G335800.1	Wheat	mitochondrion	58.68	57.52
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	50.42	50.68
PGSC0003DMT400070732	Potato	plasma membrane	48.57	50.09
PGSC0003DMT400075163	Potato	plasma membrane	48.57	49.66
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	48.23	48.47
PGSC0003DMT400035882	Potato	plasma membrane	46.21	46.28
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	20.57	45.86
HORVU2Hr1G081050.1	Barley	endoplasmic reticulum, extracellular	5.23	44.93
Os04t0464400-00	Rice	peroxisome, plasma membrane	40.47	38.52
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	36.93	36.2
PGSC0003DMT400045415	Potato	plasma membrane	34.57	35.65
PGSC0003DMT400007441	Potato	plasma membrane	34.91	35.45
PGSC0003DMT400030533	Potato	plasma membrane	34.74	35.4
PGSC0003DMT400082762	Potato	plasma membrane	26.81	35.18
PGSC0003DMT400030530	Potato	mitochondrion	20.24	34.19
PGSC0003DMT400030534	Potato	plasma membrane	33.39	33.85
PGSC0003DMT400065182	Potato	plasma membrane	32.55	32.77
PGSC0003DMT400046950	Potato	plasma membrane	33.73	32.73
PGSC0003DMT400045412	Potato	mitochondrion	34.57	32.7
PGSC0003DMT400011063	Potato	cytosol	32.04	32.59
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	35.58	32.31
PGSC0003DMT400054593	Potato	plasma membrane	31.03	29.97
PGSC0003DMT400071504	Potato	plasma membrane	29.34	29.15

Protein Annotations

EntrezGene:102604781	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:M0ZJ30	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	EnsemblPlantsGene:PGSC0003DMG402000668	PGSC:PGSC0003DMG402000668
EnsemblPlants:PGSC0003DMT400001784	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF154	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000296F3FC	RefSeq:XP_006357958.1	SEG:seg	:	:	:

Description

Nitrate transporter NRT1.1 [Source:PGSC_GENE;Acc:PGSC0003DMG402000668]

Coordinates

chr7:-:45033113..45036254

Molecular Weight (calculated)

65123.7 Da

IEP (calculated)

9.478

GRAVY (calculated)

0.258

Length

593 amino acids

Sequence
(BLAST)

001: MVLVDNHAGK DGAEDGNLVD FRGNPVDKSR TGGWLAAGLI LGTELSERVC VMGISMNLVT YLVGDLHLPS SNSANIVTNF MGTLNLLGLL GGFLADAKLG
101: RYLTVAIFAS IAAVGVTLLT LATSIPSMKP PECNPRKGGH CIEASGQQLA LLYTALYILA LGGGGIKSNV SGFGSDQFDS SDPKENKSMI YFFNRFYFCI
201: SLGSLFAVTV LVYLQDNVGR AWGYGISAGT MVLGVAVLIG GTTLYRFKKP QGSPLTIIWR VLLLAWRKRK LTYPSDPGFL NGYHNAKVPH THMLRCLDKA
301: AILDDSAAAN EDSKSPWIVS TVTEVEEVKM VLKLIPIWST CILFWTVYSQ MNTFTIEQAT FMNRKVGNFA VPAGSLSVFL FISILLFTSI NERVIVRIAR
401: KITHNTQGIT SLQRVGIGLL LSIVGMVASA LVEKRRREHA IHHKFNISAF WLAPQFFIVG AGEAFAYVGQ LEFFIREAPE GMKSMSTGLF LSTLSMGYFV
501: SSLLVSLVQK ATKGRWLKSN LNKGKLDLFY WLLAVLGVIN FLIFIAFSMK HQYKVQKQNL SSIEDSAEEL GNWKDLTLDN KEKKLEADEK VEA

Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)

001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP

Arabidopsis Description

NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.