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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES05323 Sorghum plasma membrane 83.58 85.26
Zm00001d016982_P001 Maize plasma membrane 82.59 84.4
TraesCS5B01G414000.3 Wheat plasma membrane 80.79 82.83
TraesCS5D01G419200.2 Wheat plasma membrane 80.46 82.35
TraesCS5A01G409600.1 Wheat plasma membrane 78.49 80.47
HORVU5Hr1G099170.6 Barley plasma membrane 79.64 79.51
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 28.74 77.78
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 65.35 69.34
KRH73378 Soybean cytosol, peroxisome, plasma membrane 63.22 65.48
KRH14759 Soybean plasma membrane 62.73 65.08
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 63.05 64.86
Solyc07g049290.2.1 Tomato nucleus 62.89 64.81
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 62.56 64.25
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 62.4 64.19
Bra023868.1-P Field mustard plasma membrane 60.1 63.32
Bra031295.1-P Field mustard plasma membrane 60.43 63.01
AT3G21670.1 Thale cress plasma membrane 60.1 62.03
CDY44319 Canola plasma membrane 47.78 61.78
CDY38629 Canola plasma membrane 47.95 60.96
VIT_12s0059g01240.t01 Wine grape plastid 63.71 59.78
VIT_02s0087g00580.t01 Wine grape plasma membrane 27.42 56.42
Os08t0155400-01 Rice plasma membrane 43.84 50.86
Os10t0554200-02 Rice plasma membrane 47.78 48.83
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 46.8 48.39
Os04t0464400-00 Rice peroxisome, plasma membrane 46.96 45.91
Os06t0581000-01 Rice plasma membrane 36.12 37.29
Os01t0103100-01 Rice plasma membrane 35.3 35.48
Os11t0235200-01 Rice plasma membrane 35.8 34.82
Os04t0491500-02 Rice plasma membrane 31.53 34.47
Os04t0441800-01 Rice plasma membrane 34.48 34.37
Os12t0231000-01 Rice plasma membrane 32.51 33.96
Os11t0283500-01 Rice plasma membrane 31.03 32.42
Os11t0282800-00 Rice plasma membrane 31.69 32.01
Os11t0284300-00 Rice mitochondrion 15.6 30.16
Os04t0491200-00 Rice plasma membrane, vacuole 20.85 19.39
Os01t0749000-02 Rice cytosol, plastid 0.33 0.79
Os04t0491350-00 Rice plasma membrane 0.33 0.43
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EMBL:AK120486ProteinID:BAD27632.1ProteinID:BAD29585.1ProteinID:BAF09154.1
ProteinID:BAS79419.1ProteinID:EEE57256.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfEnsemblPlantsGene:Os02g0580900EnsemblPlants:Os02t0580900-01PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654
PANTHER:PTHR11654:SF154UniProt:Q6EP35SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI00003CE480SEG:seg
Description
nitrate transporter 1.3ATGF-beta receptor, type I/II extracellular region family protein. (Os02t0580900-01);Similar to peptide transporter PTR2. (Os02t0580900-02)
Coordinates
chr2:-:22369930..22374416
Molecular Weight (calculated)
64679.8 Da
IEP (calculated)
8.881
GRAVY (calculated)
0.340
Length
609 amino acids
Sequence
(BLAST)
001: MVAAGGGHGG GADDGMVVDY RGNPVDKSKT GGWLGAGLIL GTELAERVCV MGISMNLVTY LVGDLHLSNA KSANIVTNFM GTLNLLALVG GFLADAKLGR
101: YLTIAISATI AATGVSLLTV DTMVPGMRPP PCADARGAGA HLRCEPARGG QLAMLYAALY TVAAGAGGLK ANVSGFGSDQ FDGGDPREER AMVFFFNRFY
201: FCISLGSLFA VTVLVYVQDN VGRGWGYGVS AVAMVLAVAV LVAGTPKYRY RRPEGSPLTV IGRVLATAWR KRRLPLPADA GELHGYHTSK VAYTDRLRCL
301: DRAAIMEADL AASPAKTNQT SAAPAATVTE VEEVKMVVKL LPIWSTCILF WTVYSQMTTF SVEQATRMDR HLRPGAAPGG FAIPAGSLSV FLFLSILLFT
401: SLNERVLVPA ARRLTRRPQG LTSLQRVGAG LVLATVAMAT SALVEKKRRD AANDGGGGGM ISAFWLVPQF FLVGAGEAFA YVGQLEFFIR EAPERMKSMS
501: TGLFLVTLSM GFFLSSFLVF AVDAATRGAW IRNDLDAGRL DLFYWMLAVL GVANFAVFLV FARRHEYKQP AGTAAVVVAP AAAKDGGAGE EKEMDDFVVV
601: KEAVEGMDV
Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Arabidopsis Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.