Factsheet for PGSC0003DMT400071504

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 5
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g005950.1.1	Tomato	plasma membrane	80.23	76.4
KRH21158	Soybean	plasma membrane	56.11	56.3
KRH11088	Soybean	plasma membrane	55.11	54.92
KRH42929	Soybean	plasma membrane	55.28	54.73
KRH59041	Soybean	plasma membrane	53.43	53.7
TraesCS3A01G272600.1	Wheat	plasma membrane	46.4	51.97
Zm00001d043463_P001	Maize	plasma membrane	47.4	51.74
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	26.13	50.81
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	46.73	48.86
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	45.39	44.21
PGSC0003DMT400030530	Potato	mitochondrion	25.46	43.3
PGSC0003DMT400082762	Potato	plasma membrane	31.49	41.59
PGSC0003DMT400030534	Potato	plasma membrane	39.2	40.0
PGSC0003DMT400030533	Potato	plasma membrane	37.19	38.14
PGSC0003DMT400054593	Potato	plasma membrane	37.35	36.32
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	36.68	36.2
PGSC0003DMT400011063	Potato	cytosol	35.18	36.02
PGSC0003DMT400046950	Potato	plasma membrane	36.18	35.35
PGSC0003DMT400007441	Potato	plasma membrane	34.34	35.1
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	14.91	33.46
PGSC0003DMT400045415	Potato	plasma membrane	32.16	33.39
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	32.5	32.88
PGSC0003DMT400065182	Potato	plasma membrane	32.33	32.77
PGSC0003DMT400075163	Potato	plasma membrane	31.83	32.76
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	30.99	31.36
PGSC0003DMT400070732	Potato	plasma membrane	30.15	31.3
PGSC0003DMT400045412	Potato	mitochondrion	32.66	31.1
PGSC0003DMT400035882	Potato	plasma membrane	30.82	31.08
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	29.15	29.34
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	28.98	29.22
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	27.47	25.11

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:M1CNW8	InterPro:MFS_dom	InterPro:MFS_trans_sf	InterPro:OBAP-like	PFAM:PF00854	PFAM:PF06884
EnsemblPlantsGene:PGSC0003DMG400027817	PGSC:PGSC0003DMG400027817	EnsemblPlants:PGSC0003DMT400071504	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF131
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000296EB95	SEG:seg	:	:

Description

Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400027817]

Coordinates

chr3:-:917915..925305

Molecular Weight (calculated)

67146.4 Da

IEP (calculated)

8.139

GRAVY (calculated)

0.248

Length

597 amino acids

Sequence
(BLAST)

001: MHYDVADAAT QVTNYSGTSY ILTVLVAILA DTYIGRFTAV FVSCWIEFLG LGLLAFQAHY PKYKPTLCNI LDPTSNCEKV DGKNAALLFV ALYLVALGSA
101: GIKSALPSHG ADQFDEKDKK EAIQMSSFFN WLLLAVCLGG SFSTTFIVWI QEHKGWDWGF FVSTLAMLCG AIIFCVGLPW YRIFVIKGRS AITEIFQVYV
201: AAIRNRNLQL PQDSSNLYEI DEDEEAAIQA EFLPHTDTYK FLDKAAIIQT SQQQQQQQSA KTINPWRLCR VTQVENAKIL LSMVPVFCCT IIMTLCLAQL
301: QTFSIQQGFT MDTRITNSFH IPPASLPIIP IVFLIIIIPV YDQIIVPILR KFTGIPTGIT YLQRVGVGLV LSALSMTAAS ILEVKRKQVA REHNMLDAIP
401: VLQPLPISVF WLSIQFFIFG IADMFTYVGL LEFFYSQAPK ELKSVSSCFL WTSMSIGYFL SSIIVKIVNK ATKKIKSGLW VNPRVPEMVI RPELENLTKT
501: YGKFWCTWQT DRGDKLPIGP PSLMMSPQPV DLGIVKIGLV KKRDDKYNIS TDAMKTARAD LSERTRLNPR ADYWVEHGKG FMIDVEDVEM KKIAPFP

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.