Factsheet for Zm00001d043463_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	87.39	77.98
TraesCS3A01G272600.1	Wheat	plasma membrane	72.39	74.3
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	73.49	70.4
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	36.56	65.15
KRH11088	Soybean	plasma membrane	54.48	49.75
KRH21158	Soybean	plasma membrane	54.11	49.75
KRH59041	Soybean	plasma membrane	53.56	49.33
Solyc03g005950.1.1	Tomato	plasma membrane	56.31	49.12
KRH42929	Soybean	plasma membrane	54.11	49.09
PGSC0003DMT400071504	Potato	plasma membrane	51.74	47.4
Zm00001d003208_P001	Maize	plasma membrane	32.91	39.22
Zm00001d004621_P001	Maize	plasma membrane	34.73	39.09
Zm00001d046383_P001	Maize	plasma membrane	39.85	36.82
Zm00001d003603_P001	Maize	plasma membrane	38.57	35.76
Zm00001d007255_P001	Maize	plasma membrane	40.22	35.31
Zm00001d036941_P001	Maize	plasma membrane	39.31	35.3
Zm00001d036942_P001	Maize	plasma membrane	34.37	34.81
Zm00001d024587_P001	Maize	plasma membrane	38.03	34.21
Zm00001d029932_P001	Maize	plasma membrane	35.65	32.77
Zm00001d041163_P001	Maize	plasma membrane	34.37	32.64
Zm00001d029933_P001	Maize	cytosol, peroxisome, plasma membrane	34.55	32.14
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	34.37	31.81
Zm00001d016982_P001	Maize	plasma membrane	34.37	31.54
Zm00001d027285_P001	Maize	cytosol, plasma membrane, vacuole	34.19	31.17
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	33.46	30.96
Zm00001d040201_P001	Maize	plasma membrane	34.19	28.29
Zm00001d049349_P001	Maize	mitochondrion	36.56	27.89
Zm00001d025748_P001	Maize	plasma membrane	26.14	26.05

Protein Annotations

MapMan:24.2.2.9	UniProt:A0A1D6NC75	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	ProteinID:ONM38116.1	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF131
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0008430314	EnsemblPlantsGene:Zm00001d043463	EnsemblPlants:Zm00001d043463_P001	EnsemblPlants:Zm00001d043463_T001
SEG:seg	:	:	:	:	:

Description

Protein NRT1/ PTR FAMILY 4.2

Coordinates

chr3:+:200800529..200802455

Molecular Weight (calculated)

60900.1 Da

IEP (calculated)

9.116

GRAVY (calculated)

0.323

Length

547 amino acids

Sequence
(BLAST)

001: MASLSLAVNL MMYFLGVMHL NLEDASNLLT NYMGASYMIS VLISVFADVF VGRYMTVILS SLVELVGLLL LMLQARSDRL KPPPCKDPRD PTTCPRVHGS
101: NEVHLYLALY LIALGSGGIK AALPAHCADQ FDAKHPREKL QMSSCFNYLL LSLCTGGAFS VTVFVWIQEN KGWAKGFAAA TGVMGLAVIV FIAGLPRYRI
201: ATVQGSSALK EIFQVYVAAV RNRKQQLPEN PDELYEISKN KASPDTEFVA HRDRPFRFLD RAAIVQTAKD AAADPWRQCR VTQVEHAKTV LAMVPIFCSA
301: IIMGTCLAQL QTFSMVQGST MDTALGRHFQ MPVASMPIIP LVFLIFAVPI YEQLFVPFAR RLTGIPTGIT YLQRVGVGLV LSIVSMVMAA VVEVQRKKVA
401: ERHGMLDMIP GFQHLPMSCF WLAPQFAVFG IADMFTYVGL MEFFYSQAPQ ALKSMSSSFL WCSLSLGYFM STVIVKAVNK ATKKKTASGG WLAGENINRN
501: HLDLFFWLLA VLSTVNLFNY LFWASWYKYK PQEKTLATEN EKQQEQV

Best Arabidopsis Sequence Match ( AT1G33440.1 )
(BLAST)

001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I

Arabidopsis Description

NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.