Factsheet for Zm00001d040201_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00465	Sorghum	plastid	94.7	93.85
EES19057	Sorghum	plastid	32.68	86.4
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	77.46	78.77
HORVU3Hr1G014510.3	Barley	plastid	77.31	78.37
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	76.85	77.68
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	73.68	77.42
Os01t0103100-01	Rice	plasma membrane	67.78	73.93
CDX85654	Canola	cytosol, plasma membrane, plastid	68.23	72.51
Bra023408.1-P	Field mustard	plastid	68.08	72.35
CDX91126	Canola	plastid	68.08	72.35
AT5G13400.1	Thale cress	plasma membrane	66.87	70.83
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.38	70.62
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	67.02	70.21
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	62.03	68.91
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	66.87	67.69
Zm00001d016982_P001	Maize	plasma membrane	34.34	38.09
Zm00001d029932_P001	Maize	plasma membrane	34.04	37.82
Zm00001d029933_P001	Maize	cytosol, peroxisome, plasma membrane	32.98	37.07
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	32.83	36.72
Zm00001d024587_P001	Maize	plasma membrane	32.98	35.86
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	31.77	35.53
Zm00001d027285_P001	Maize	cytosol, plasma membrane, vacuole	32.22	35.5
Zm00001d043463_P001	Maize	plasma membrane	28.29	34.19
Zm00001d004621_P001	Maize	plasma membrane	24.96	33.95
Zm00001d046383_P001	Maize	plasma membrane	29.8	33.28
Zm00001d041163_P001	Maize	plasma membrane	28.44	32.64
Zm00001d036941_P001	Maize	plasma membrane	29.8	32.35
Zm00001d003208_P001	Maize	plasma membrane	22.39	32.24
Zm00001d036942_P001	Maize	plasma membrane	26.32	32.22
Zm00001d003603_P001	Maize	plasma membrane	28.29	31.69
Zm00001d007255_P001	Maize	plasma membrane	29.05	30.82
Zm00001d049349_P001	Maize	mitochondrion	30.11	27.75
Zm00001d025748_P001	Maize	plasma membrane	22.39	26.96

Protein Annotations

EntrezGene:100384152	MapMan:24.2.2.9	EMBL:BT069311	UniProt:C0PLZ2	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf	ProteinID:ONM30813.1
PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112	InterPro:PTR2_symporter_CS
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00005A96A4	EnsemblPlantsGene:Zm00001d040201	EnsemblPlants:Zm00001d040201_P001	EnsemblPlants:Zm00001d040201_T001
SEG:seg	:	:	:	:	:

Description

Protein NRT1/ PTR FAMILY 6.1

Coordinates

chr3:-:31720341..31722326

Molecular Weight (calculated)

71872.4 Da

IEP (calculated)

7.899

GRAVY (calculated)

0.334

Length

661 amino acids

Sequence
(BLAST)

001: MAPASETELQ APPPPPASAK EIKSPEVLPE PGSLSALQRK KLGAHFMESD ERRVSRARTP LGAAYEPPSA AAGGGGTTPV NIRGEPIQDL SRTGGWVAAF
101: FIFGNEMAER MAYFGLSVNM VIFMFKVMHR PFASSANAVN NFLGISQASS VLGGFLADAY LGRYWTIAIF TTMYLLGLIA LTVSASVPAL VPPQEGCDKL
201: AMLLGACAPA APWQMAYLQT ALYVTALGAA GIRPCVSSFG ADQFDERSPE YKRRLDRFFN LFYLAVTLGA IAAFTAVVYI QMQHGWAAAF GTLALAMGTS
301: NALFFVGTPL YRHRLPGGSP LTRVAQVLVA AFRKRDAAFD SGDFVGLYEV AGAKSAIRGS AKIDHTDDFR WLDKAALQLE GDLAGGEDEE AVNPWRLCTV
401: TQVEEVKILL RLLPVPACTV MLSVVLTEFL TLSVQQAYTL NTRVAALHLP VTCMPVFPCL AIFLILALYY QTFAPLARRL TGHPHGASQL QRVGLGLFFS
501: ILSVAWAGLF ERYRRGYAVR HGYLGLFLTP MPDLSAYWLL IQYCLIGVAE VFCLVALLEF LYQEAPDAMR SVGSAYAAVA GGLGCFVASA INTAVDAATR
601: DDEEGRPSWL AQNINVGRFD YLYWLLAVLS TVNLLIFVFF AKRYKYRVRV DVPTTVAVDK Q

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.