CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
cytosol 1
vacuole 2
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.2	82.03
Bra023408.1-P	Field mustard	plastid	78.13	79.26
CDX85654	Canola	cytosol, plasma membrane, plastid	77.97	79.1
CDX91126	Canola	plastid	77.97	79.1
AT5G13400.1	Thale cress	plasma membrane	77.65	78.53
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	78.61	75.96
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	71.0	75.29
EES00465	Sorghum	plastid	71.47	67.62
Zm00001d040201_P001	Maize	plasma membrane	70.21	67.02
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	68.46	66.46
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	68.78	66.36
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	65.93	66.14
HORVU3Hr1G014510.3	Barley	plastid	68.15	65.95
Os01t0103100-01	Rice	plasma membrane	62.92	65.51
EES19057	Sorghum	plastid	23.61	59.6
KRH28055	Soybean	plasma membrane	34.71	37.37
KRH77380	Soybean	cytosol, plasma membrane, plastid	34.39	37.03
KRH14759	Soybean	plasma membrane	33.91	36.46
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	33.91	36.39
KRH51937	Soybean	plasma membrane	32.81	36.19
KRG96656	Soybean	plasma membrane	32.17	35.24
KRH68384	Soybean	plasma membrane	32.17	34.88
KRH04097	Soybean	peroxisome	32.65	34.68
KRH20280	Soybean	plasma membrane	31.38	34.08
KRH03705	Soybean	plasma membrane	31.38	33.85
KRH45840	Soybean	plasma membrane	31.85	33.84
KRH33721	Soybean	plasma membrane	32.33	33.77
KRG99175	Soybean	plasma membrane	31.22	33.68
KRH51284	Soybean	plasma membrane	30.11	33.51
KRH42929	Soybean	plasma membrane	32.01	33.5
KRH61236	Soybean	plasma membrane	32.49	33.5
KRG90426	Soybean	plasma membrane	31.85	33.44
KRH03418	Soybean	plasma membrane	30.74	33.33
KRH59041	Soybean	plasma membrane	31.38	33.33
KRH45842	Soybean	plasma membrane	31.38	33.33
KRH69373	Soybean	plasma membrane	30.59	33.28
KRH74766	Soybean	plasma membrane	30.43	33.16
KRH56961	Soybean	plasma membrane	30.43	32.93
KRH19434	Soybean	plasma membrane	30.59	32.71
KRH01875	Soybean	plasma membrane	27.73	32.47
KRH02511	Soybean	plasma membrane	30.43	32.32
KRH21158	Soybean	plasma membrane	30.43	32.27
KRH11088	Soybean	plasma membrane	30.59	32.22
KRH57369	Soybean	plasma membrane	30.11	32.2
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	29.48	30.39

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100816600	MapMan:24.2.2.9	EMBL:ACUP02011530	EnsemblPlantsGene:GLYMA_18G299200	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:I1N5E5	InterPro:IPR020846	EnsemblPlants:KRH01794
ProteinID:KRH01794	ProteinID:KRH01794.1	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000233F41B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:57679867..57684162

Molecular Weight (calculated)

69998.2 Da

IEP (calculated)

9.185

GRAVY (calculated)

0.272

Length

631 amino acids

Sequence
(BLAST)

001: MDSSEIKSPA EGSQQGTPGN SLRRKKLAIY FIESEDRRMA FGRGYTAGST PVDIHGKSIV DLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFTSSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTIYLAGL TGITLCATIS KFVPNQEECD QFSLLLGNCE AAKPWQMTYL YTALYITAFG
201: AAGIRPCVSS FGADQFDERS KNYKAHLDRF FNIFYLSVTI GAIVAFTVVV YVQMKFGWGS AFGSLAIAMG ISNMVFFIGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAS FGSSEFIGLY EVPGRQSAIK GSRKISHTDD FRFLDKAALQ LKEDGANPSP WRLCTVTQVE EVKILMKLIP IPACTIMLNV VLTEFLTLSV
401: QQAYTLNTHL GRLKLPVTCM PVFPGLSVFL ILSLYYSIFV PVFRRITGHP HGASQLQRVG IGLAVSILSV AWAAIFERYR RNYAIKHGYL ASFLTAMPNL
501: SAYWLLIQYC LIGVAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFVATIINNI IKSATGNLDK GQPSWLSQNI NTGRFDYFYW LLTALSIINF
601: AIFVYSAHRY KYREHQVHEM EKHEMTYVGS S

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.