Factsheet for TraesCS3D01G081100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	95.26	95.85
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	90.37	93.96
HORVU3Hr1G014510.3	Barley	plastid	92.81	93.1
EES00465	Sorghum	plastid	79.97	78.41
Zm00001d040201_P001	Maize	plasma membrane	77.68	76.85
Os01t0103100-01	Rice	plasma membrane	69.72	75.25
EES19057	Sorghum	plastid	26.91	70.4
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.89	69.38
CDX85654	Canola	cytosol, plasma membrane, plastid	65.75	69.13
CDX91126	Canola	plastid	65.75	69.13
Bra023408.1-P	Field mustard	plastid	65.6	68.97
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	66.36	68.78
AT5G13400.1	Thale cress	plasma membrane	64.83	67.95
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	61.01	67.06
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	66.06	66.16
TraesCS2D01G327000.1	Wheat	plasma membrane	32.11	37.17
TraesCS1D01G214200.1	Wheat	plasma membrane	33.18	36.41
TraesCS1D01G214300.1	Wheat	plasma membrane	33.03	36.3
TraesCS4D01G361500.1	Wheat	peroxisome	33.33	35.97
TraesCS1D01G032700.1	Wheat	peroxisome	31.8	35.74
TraesCS5D01G419200.2	Wheat	plasma membrane	32.42	35.63
TraesCS7D01G297000.1	Wheat	plasma membrane	31.5	34.16
TraesCS2D01G259400.2	Wheat	plasma membrane	28.9	32.64
TraesCS2D01G307400.1	Wheat	plasma membrane	28.9	32.47
TraesCS5D01G067400.1	Wheat	plasma membrane	27.52	32.09
TraesCS2D01G348600.1	Wheat	plasma membrane	27.37	32.02
TraesCS2D01G348500.1	Wheat	plasma membrane	27.22	31.84
TraesCS5D01G067100.1	Wheat	plasma membrane	27.22	31.73
TraesCS5D01G398000.1	Wheat	plasma membrane	27.06	30.46
TraesCS7D01G357300.2	Wheat	plasma membrane	28.75	30.42
TraesCS4D01G087900.1	Wheat	golgi, peroxisome, plasma membrane	27.98	30.25
TraesCS2D01G348400.1	Wheat	plasma membrane	23.55	28.0

Protein Annotations

EnsemblPlants:TraesCS3D01G081100.1	EnsemblPlantsGene:TraesCS3D01G081100	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	InterPro:POT_fam	InterPro:PTR2_symporter_CS	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112	PFAM:PF00854
ScanProsite:PS01022	SEG:seg	SUPFAM:SSF103473	TMHMM:TMhelix	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr3D:-:40752758..40754868

Molecular Weight (calculated)

71182.4 Da

IEP (calculated)

8.645

GRAVY (calculated)

0.295

Length

654 amino acids

Sequence
(BLAST)

001: MEEPPLTPPR NKAEEIKSPP TPREALKTSS LSLQRKKLGS HFLESDERRR FYNASSSSAA VGTTPLDIRG LPIPERDLPR TGGWVAAFFI FGNETAERMA
101: YYGLSVNMVV FMFKVMHLPF AASANAVNNF LGISQASSVL GGFLADAYLG RYWTIAAFTT LYLLGLIALT LCATLPALVP AQDGCDKLAM LLGGCAPAER
201: WQMAYLYTAL YVTAFGAAGI RPCVSSFGAD QFDDRSAGYK RRLDRFFNLF YLAVTVGAIA AFTLVVYIQM HRGWAAAFGA LALAMGASNA LFFAGTPLYR
301: HKAPGGSPLT RVAQVLVAAF RKRNADFADG GYVGLYEVAG AKSAIRGSGK IEHTDDFRWL DKAALRLDDD DEEDPWRLCT VTQVEEVKIL VRLLPVPACT
401: VMLSVVLTEF LTLSVQQAYT LNTGLLAGAV HLPVTCMPVF PCLAIFLVLA LYYQTFAPLA RRITGHPHGA SQLQRVGLGL VFSVLSVAWA GAFERYRRRY
501: AAEHGYLGLF LSPMPGLSAY WLLIQYCLIG VAEVFCLVGL IEFLYQEAPD AMRSVGSAYA AVAGGMGCFM ATALNNAVDA ATGDVRNGRP SWLAQNINVG
601: RFDYLYWLLA VLSTINFAVF LYFASIYKYR TPPPTTTAGS NSSKVEVSVV SGHK

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.