Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 3
- nucleus 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_10s0003g04020.t01 | Wine grape | cytosol | 83.98 | 85.27 |
Solyc02g021440.2.1 | Tomato | cytosol | 82.47 | 83.37 |
PGSC0003DMT400080484 | Potato | cytosol | 82.03 | 83.3 |
CDY26276 | Canola | mitochondrion | 80.52 | 80.35 |
Bra032374.1-P | Field mustard | plastid | 80.95 | 80.09 |
CDY63182 | Canola | mitochondrion | 80.09 | 79.23 |
AT1G30270.1 | Thale cress | cytosol, plastid | 82.03 | 78.63 |
TraesCS2D01G252600.1 | Wheat | cytosol | 76.41 | 77.92 |
Bra014875.1-P | Field mustard | plastid | 80.74 | 77.87 |
Os07t0150700-01 | Rice | mitochondrion | 75.54 | 77.56 |
CDX98191 | Canola | plastid | 80.95 | 77.43 |
CDX77603 | Canola | plastid | 80.74 | 77.39 |
CDX90240 | Canola | plastid | 79.87 | 77.36 |
OQU88438 | Sorghum | cytosol, mitochondrion | 72.08 | 77.26 |
GSMUA_Achr4P31540_001 | Banana | cytosol | 73.59 | 76.92 |
TraesCS2B01G271700.1 | Wheat | cytosol | 76.62 | 76.62 |
TraesCS2A01G251800.1 | Wheat | cytosol | 76.41 | 76.57 |
HORVU2Hr1G060350.5 | Barley | cytosol | 76.41 | 76.57 |
KRH12829 | Soybean | cytosol | 45.02 | 76.19 |
GSMUA_Achr4P23000_001 | Banana | cytosol | 74.03 | 76.0 |
Bra010783.1-P | Field mustard | plastid | 74.46 | 75.6 |
Zm00001d018799_P001 | Maize | mitochondrion | 75.76 | 73.07 |
KRH06391 | Soybean | cytosol | 63.42 | 66.89 |
KRH47824 | Soybean | cytosol | 63.2 | 66.67 |
KRH14660 | Soybean | cytosol | 65.37 | 65.37 |
KRH68952 | Soybean | cytosol | 62.12 | 65.23 |
KRH73488 | Soybean | cytosol | 64.72 | 63.35 |
KRH03685 | Soybean | cytosol | 55.19 | 57.17 |
KRG93778 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 35.5 | 56.75 |
KRH20252 | Soybean | cytosol | 54.11 | 56.05 |
KRH52875 | Soybean | cytosol | 51.52 | 53.36 |
KRH62165 | Soybean | cytosol | 51.52 | 53.36 |
KRH72505 | Soybean | cytosol | 50.87 | 52.93 |
CDY49976 | Canola | cytosol | 44.59 | 52.82 |
KRH19498 | Soybean | cytosol | 49.57 | 51.35 |
KRH12685 | Soybean | cytosol | 47.84 | 50.57 |
KRH15841 | Soybean | cytosol | 27.92 | 50.19 |
KRH37641 | Soybean | cytosol | 48.27 | 49.78 |
KRH02470 | Soybean | cytosol | 48.27 | 49.78 |
KRH42588 | Soybean | cytoskeleton, cytosol, nucleus | 46.1 | 47.33 |
KRH44935 | Soybean | cytosol | 27.27 | 45.65 |
KRH02907 | Soybean | cytosol | 46.1 | 45.61 |
KRH45118 | Soybean | plasma membrane | 35.93 | 35.55 |
KRH44934 | Soybean | cytosol, endoplasmic reticulum, nucleus | 34.63 | 31.37 |
KRH01228 | Soybean | cytosol, nucleus | 34.63 | 31.13 |
KRH18445 | Soybean | cytosol, endoplasmic reticulum | 34.2 | 30.68 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr9:-:11977014..11985918
Molecular Weight (calculated)
51706.4 Da
IEP (calculated)
9.185
GRAVY (calculated)
-0.352
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSRSGQGSS GGGSSRTRVG KYELGRTLGE GNFAKVKFAR HVETRENVAI KILDKEKLLK HKMIAQIKRE ISTMKLIRHP NVIRMYEVMA SKTKIYIVLE
101: FVTGGELFDK IARSGRLKED EARKYFQQLI CAVDYCHSRG VFHRDLKPEN LLLDANGVLK VSDFGLSALP QQVREDGLLH TTCGTPNYVA PEVINNKGYD
201: GAKADLWSCG VILFVLMAGY LPFEETNLSA LYKKIFKAEF TCPPWFSSSA KKLINKILDP NPATRITFAE VIENDWFKKG YKPPVFEQAN VSLDDLDSIF
301: SDSTDSQNLV VERREEGPMA PVAPVTMNAF ELISKSQGLN LSSLFEKQMG LVKRETRFTS KCSADEIISK IEKAAGPLGF DVKKNNCKLK IQGEKTGRKG
401: HLSVATEILE VAPSLYMVEL RKSEGDTLEF HKFYKNLATG LKDIVWKAEP IDEEKDGANP SK
101: FVTGGELFDK IARSGRLKED EARKYFQQLI CAVDYCHSRG VFHRDLKPEN LLLDANGVLK VSDFGLSALP QQVREDGLLH TTCGTPNYVA PEVINNKGYD
201: GAKADLWSCG VILFVLMAGY LPFEETNLSA LYKKIFKAEF TCPPWFSSSA KKLINKILDP NPATRITFAE VIENDWFKKG YKPPVFEQAN VSLDDLDSIF
301: SDSTDSQNLV VERREEGPMA PVAPVTMNAF ELISKSQGLN LSSLFEKQMG LVKRETRFTS KCSADEIISK IEKAAGPLGF DVKKNNCKLK IQGEKTGRKG
401: HLSVATEILE VAPSLYMVEL RKSEGDTLEF HKFYKNLATG LKDIVWKAEP IDEEKDGANP SK
001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST
Arabidopsis Description
CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.