CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04244
KRH28207
KRH57533

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24400.1	KRH04244	AT5G47100.1	14730064
AT4G24400.1	KRH28207	AT5G47100.1	14730064
AT4G24400.1	KRH57533	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52875	Soybean	cytosol	97.53	97.53
KRH72505	Soybean	cytosol	87.44	87.84
VIT_18s0001g07980.t01	Wine grape	cytosol	86.32	86.13
PGSC0003DMT400016336	Potato	cytosol	83.63	83.45
Solyc04g076810.2.1	Tomato	cytosol	82.96	82.77
AT4G24400.1	Thale cress	cytosol	80.49	80.67
CDY68878	Canola	cytosol, plastid	79.6	79.6
Bra013799.1-P	Field mustard	cytosol	73.77	78.9
KRG93778	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.9	78.55
CDY03449	Canola	cytosol	79.6	78.37
Os01t0536000-01	Rice	cytosol	76.46	76.46
KXG32670	Sorghum	cytosol	76.91	75.55
Zm00001d000080_P007	Maize	cytosol	76.23	75.39
TraesCS3D01G203000.4	Wheat	cytosol	75.56	75.06
TraesCS3B01G225800.1	Wheat	cytosol	74.89	74.39
TraesCS3A01G200900.1	Wheat	cytosol	74.44	73.94
KRH03685	Soybean	cytosol	65.25	65.25
KRH20252	Soybean	cytosol	64.13	64.13
Zm00001d044553_P006	Maize	cytosol, plasma membrane, plastid	71.75	63.87
GSMUA_Achr4P13410_001	Banana	cytosol, mitochondrion	78.03	54.12
KRH47824	Soybean	cytosol	52.91	53.88
KRH14660	Soybean	cytosol	55.38	53.46
KRH06391	Soybean	cytosol	52.24	53.2
KRH73488	Soybean	cytosol	56.05	52.97
KRH68952	Soybean	cytosol	51.12	51.82
KRH37794	Soybean	cytosol	53.36	51.52
KRH12685	Soybean	cytosol	43.72	44.62
KRH19498	Soybean	cytosol	44.62	44.62
KRH02470	Soybean	cytosol	44.62	44.42
KRH37641	Soybean	cytosol	44.62	44.42
KRH44935	Soybean	cytosol	26.91	43.48
KRH02907	Soybean	cytosol	45.52	43.47
KRH15841	Soybean	cytosol	22.87	39.69
KRH42588	Soybean	cytoskeleton, cytosol, nucleus	37.44	37.11
KRH12829	Soybean	cytosol	20.85	34.07
KRH45118	Soybean	plasma membrane	31.17	29.76
KRH18445	Soybean	cytosol, endoplasmic reticulum	32.74	28.35
KRH44934	Soybean	cytosol, endoplasmic reticulum, nucleus	32.29	28.24
KRH01228	Soybean	cytosol, nucleus	32.51	28.21

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100785444	MapMan:18.4.5.3	MapMan:26.6.1.1.2	Gene3D:3.30.200.20	Gene3D:3.30.310.80	EMBL:ACUP02002226
EnsemblPlantsGene:GLYMA_04G090500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1JV21	InterPro:IPR000719	InterPro:IPR018451	EnsemblPlants:KRH62165	ProteinID:KRH62165
ProteinID:KRH62165.1	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343
PANTHER:PTHR24343:SF157	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00023397DB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:7961747..7967803

Molecular Weight (calculated)

50805.2 Da

IEP (calculated)

7.134

GRAVY (calculated)

-0.215

Length

446 amino acids

Sequence
(BLAST)

001: MVVRKVGKYE IGRTIGEGTF AKVKFAQNTE TGESVAMKVL DRSTIIKHKM ADQIKREISI MKLVRHPYVV RLHEVLASRT KIYIILEFIT GGELFDKIIH
101: HGRLSETDSR RYFQQLIDGV DYCHSKGVYH RDLKPENLLL DSLGNIKISD FGLSAFPEQG VSILRTTCGT PNYVAPEVLS HKGYNGAVAD VWSCGVILYV
201: LLAGYLPFDE LDLTTLYSKI ERAEFSCPPW FPVGAKLLIH RILDPNPETR ITIEHIRNDE WFQRSYVPVS LLEYEDVNLD DVNAAFDDAE ELRADQQCDN
301: DDMGPLMLNA FDLIILSQGL NLATIFDRGQ DSVKYQTRFI SQKPAKVVLS SMEVVAQSMG FKTHIRNYKM RVEGVSANKT SYFSVILEIF EVAPTFYMVD
401: IQKAAGDTGE YLKFYKNFCS NLEDIIWKPP HEASKSRISK TKSKRR

Best Arabidopsis Sequence Match ( AT4G24400.1 )
(BLAST)

001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRSTIIKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSESEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD IWSCGVILYV
201: LMAGYLPFDE MDLPTLYSKI DKAEFSCPSY FALGAKSLIN RILDPNPETR ITIAEIRKDE WFLKDYTPVQ LIDYEHVNLD DVYAAFDDPE EQTYAQDGTR
301: DTGPLTLNAF DLIILSQGLN LATLFDRGKD SMKHQTRFIS HKPANVVLSS MEVVSQSMGF KTHIRNYKMR VEGLSANKTS HFSVILEVFK VAPSILMVDI
401: QNAAGDAEEY LKFYKTFCSK LDDIIWKPPD ASMRNRVTKA KSKRR

Arabidopsis Description

CIPK8CBL-interacting serine/threonine-protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.