CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 21417358

msms PMID: 21417358 doi

DR Demartini, R Jain, G Agrawal, JJ Thelen

Department of Biochemistry and Interdisciplinary Plant Group, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri 65211, United States.

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY25987
CDY28977
CDY40580
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24400.1	CDY25987	AT5G47100.1	14730064
AT4G24400.1	CDY28977	AT5G47100.1	14730064
AT4G24400.1	CDY40580	AT5G47100.1	14730064
AT4G24400.1	CDY69850	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013799.1-P	Field mustard	cytosol	92.6	99.04
CDY03449	Canola	cytosol	99.33	97.79
AT4G24400.1	Thale cress	cytosol	94.84	95.06
PGSC0003DMT400016336	Potato	cytosol	80.49	80.31
KRH52875	Soybean	cytosol	79.82	79.82
Solyc04g076810.2.1	Tomato	cytosol	79.82	79.64
KRH62165	Soybean	cytosol	79.6	79.6
VIT_18s0001g07980.t01	Wine grape	cytosol	78.7	78.52
KRH72505	Soybean	cytosol	76.68	77.03
Zm00001d000080_P007	Maize	cytosol	73.09	72.28
TraesCS3D01G203000.4	Wheat	cytosol	71.97	71.49
TraesCS3B01G225800.1	Wheat	cytosol	71.97	71.49
Os01t0536000-01	Rice	cytosol	71.3	71.3
TraesCS3A01G200900.1	Wheat	cytosol	71.52	71.05
KXG32670	Sorghum	cytosol	72.2	70.93
KRG93778	Soybean	endoplasmic reticulum, plasma membrane, vacuole	45.29	69.9
Zm00001d044553_P006	Maize	cytosol, plasma membrane, plastid	68.39	60.88
CDY44603	Canola	cytosol	60.09	59.16
CDY36813	Canola	cytosol	59.87	58.94
CDY16600	Canola	cytosol	54.48	55.23
CDX92400	Canola	cytosol	54.48	55.1
CDY37992	Canola	cytosol	48.43	54.27
CDY48189	Canola	cytosol, mitochondrion	53.36	54.09
CDX77058	Canola	cytosol, mitochondrion	53.36	54.09
CDY09107	Canola	cytosol	52.69	53.29
CDY26276	Canola	mitochondrion	54.93	52.92
CDY32442	Canola	cytosol	52.47	52.58
CDY63182	Canola	mitochondrion	54.71	52.25
CDX90013	Canola	cytosol	52.02	51.9
CDY15197	Canola	cytosol	52.02	51.9
GSMUA_Achr4P13410_001	Banana	cytosol, mitochondrion	73.09	50.7
CDX90240	Canola	plastid	53.36	49.9
CDX77603	Canola	plastid	53.81	49.79
CDX98191	Canola	plastid	53.81	49.69
CDY23677	Canola	cytosol	40.58	45.36
CDX93655	Canola	cytosol	43.05	45.18
CDX93653	Canola	cytosol	43.05	45.18
CDY43284	Canola	cytosol	43.05	45.07
CDY43285	Canola	cytosol	42.6	44.71
CDY41846	Canola	cytosol	41.26	44.02
CDY25896	Canola	cytosol	41.03	43.99
CDX75921	Canola	cytosol	43.72	43.92
CDX82366	Canola	cytosol	43.27	43.57
CDX92136	Canola	cytosol	43.5	43.5
CDY49727	Canola	cytosol	38.12	42.93
CDX88633	Canola	cytosol	39.01	42.34
CDY11858	Canola	cytosol	40.13	41.82
CDY68292	Canola	nucleus	21.75	41.81
CDX95849	Canola	plasma membrane	43.27	41.33
CDY49976	Canola	cytosol	29.6	33.85
CDX74283	Canola	cytosol	35.2	31.34
CDY43267	Canola	cytosol	34.98	30.83
CDY37545	Canola	cytosol	34.98	30.83
CDY55800	Canola	cytosol	34.75	30.33
CDY34697	Canola	cytosol	34.75	30.33
CDX85250	Canola	cytosol	34.75	30.27
CDX86386	Canola	cytosol	34.75	30.21
CDY04058	Canola	cytosol	34.3	30.12
CDY44405	Canola	cytosol	34.3	29.82
CDX74460	Canola	cytosol	32.29	29.15
CDX97762	Canola	cytosol	32.29	29.15
CDX91963	Canola	plasma membrane	34.53	12.42

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	MapMan:26.6.1.1.2	Gene3D:3.30.200.20	Gene3D:3.30.310.80	GO:A0A078JN03	UniProt:A0A078JN03
EnsemblPlants:CDY68878	ProteinID:CDY68878	ProteinID:CDY68878.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00080950001	InterPro:IPR000719	InterPro:IPR018451
InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF157
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE5D64

Description

BnaA01g35110DNon-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078JN03]

Coordinates

chrLK038187:-:1027..4108

Molecular Weight (calculated)

50381.9 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.204

Length

446 amino acids

Sequence
(BLAST)

001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRNTILKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSEAEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD VWSCGVILYV
201: LMAGYLPFDE MDLPTLYMTS IDNADFSCPS YFALGAKALI RRILDPNPET RITIAEIRKD EWFVKDYTPV QVIDYEHVNL DDVYAAFDDP EEQKEAQVGT
301: GDTGPLTLNA FDLIILSQGL NLATLFDRGK DSMKHQTRFI SHKPANVVLS SMEVVSQSMG FKTHIRNYKM RVEGLSANKS SHFSVILEVF KVAPTFLMVD
401: IQNAAGDAEE YLKFYKTFCG KLDDIIWKPP DASVRNRVTK TKSKRR

Best Arabidopsis Sequence Match ( AT4G24400.1 )
(BLAST)

001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRSTIIKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSESEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD IWSCGVILYV
201: LMAGYLPFDE MDLPTLYSKI DKAEFSCPSY FALGAKSLIN RILDPNPETR ITIAEIRKDE WFLKDYTPVQ LIDYEHVNLD DVYAAFDDPE EQTYAQDGTR
301: DTGPLTLNAF DLIILSQGLN LATLFDRGKD SMKHQTRFIS HKPANVVLSS MEVVSQSMGF KTHIRNYKMR VEGLSANKTS HFSVILEVFK VAPSILMVDI
401: QNAAGDAEEY LKFYKTFCSK LDDIIWKPPD ASMRNRVTKA KSKRR

Arabidopsis Description

CIPK8CBL-interacting serine/threonine-protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.