Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68929
CDX71966
CDX72384
CDX73218
CDX73678
CDX75314
CDX79274
CDX84395
CDX86813
CDX87424
CDX87646
CDX88489
CDX90773
CDX92401
CDX94228
CDX95314
CDX96645
CDX98037
CDY01384
CDY02344
CDY04300
CDY06478
CDY09519
CDY11963
CDY12454
CDY13513
CDY16036
CDY17690
CDY19421
CDY21070
CDY23174
CDY25274
CDY25987
CDY26596
CDY28278
CDY28977
CDY29363
CDY31899
CDY36774
CDY36813
CDY38260
CDY40580
CDY41513
CDY44603
CDY45024
CDY48138
CDY51327
CDY52188
CDY54328
CDY54381
CDY57944
CDY66539
CDY67023
CDY68201
CDY68698
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35410.1 CDX71966 AT1G12840.1 17875927
AT5G35410.1 CDX98037 AT1G12840.1 17875927
AT5G35410.1 CDY16036 AT1G12840.1 17875927
AT5G35410.1 CDY19421 AT1G12840.1 17875927
AT5G35410.1 CDY21070 AT1G12840.1 17875927
AT5G35410.1 CDY26596 AT1G12840.1 17875927
AT5G35410.1 CDY66539 AT1G12840.1 17875927
AT5G35410.1 CDX96645 AT1G20260.1 17875927
AT5G35410.1 CDY01384 AT1G20260.1 17875927
AT5G35410.1 CDY29363 AT1G20260.1 17875927
AT5G35410.1 CDY31899 AT1G20260.1 17875927
AT5G35410.1 CDY51327 AT1G20260.1 17875927
AT5G35410.1 CDY54328 AT1G20260.1 17875927
AT5G35410.1 CDY02344 AT1G30860.1 21798944
AT5G35410.1 CDY09519 AT1G30860.1 21798944
AT5G35410.1 CDY12454 AT1G30860.1 21798944
AT5G35410.1 CDY52188 AT1G30860.1 21798944
AT5G35410.1 CDX73218 AT1G76030.1 17875927
AT5G35410.1 CDX87646 AT1G76030.1 17875927
AT5G35410.1 CDX79274 AT1G78900.1 17875927
AT5G35410.1 CDX87424 AT1G78900.1 17875927
AT5G35410.1 CDX88489 AT1G78900.1 17875927
AT5G35410.1 CDY57944 AT1G78900.1 17875927
AT5G35410.1 CDY67023 AT1G78900.1 17875927
AT5G35410.1 CDY17690 AT2G01190.1 21798944
AT5G35410.1 CDX73678 AT3G51920.1 17360592
AT5G35410.1 CDX95314 AT3G51920.1 17360592
AT5G35410.1 CDY23174 AT3G51920.1 17360592
AT5G35410.1 CDX86813 AT4G11150.1 17875927
AT5G35410.1 CDX90773 AT4G11150.1 17875927
AT5G35410.1 CDX94228 AT4G11150.1 17875927
AT5G35410.1 CDY25274 AT4G11150.1 17875927
AT5G35410.1 CDY68201 AT4G11150.1 17875927
AT5G35410.1 CDY68698 AT4G11150.1 17875927
AT5G35410.1 CDY06478 AT4G14640.1 17360592
AT5G35410.1 CDX68929 AT4G33000.1 17449811
AT5G35410.1 CDX72384 AT4G33000.1 17449811
AT5G35410.1 CDX75314 AT4G33000.1 17449811
AT5G35410.1 CDY04300 AT4G33000.1 17449811
AT5G35410.1 CDY13513 AT4G33000.1 17449811
AT5G35410.1 CDY28278 AT4G33000.1 17449811
AT5G35410.1 CDY45024 AT4G33000.1 17449811
AT5G35410.1 CDX68929 AT4G33000.1 17825054
AT5G35410.1 CDX72384 AT4G33000.1 17825054
AT5G35410.1 CDX75314 AT4G33000.1 17825054
AT5G35410.1 CDY04300 AT4G33000.1 17825054
AT5G35410.1 CDY13513 AT4G33000.1 17825054
AT5G35410.1 CDY28278 AT4G33000.1 17825054
AT5G35410.1 CDY45024 AT4G33000.1 17825054
AT5G35410.1 CDX68929 AT4G33000.1 19448033
AT5G35410.1 CDX72384 AT4G33000.1 19448033
AT5G35410.1 CDX75314 AT4G33000.1 19448033
AT5G35410.1 CDY04300 AT4G33000.1 19448033
AT5G35410.1 CDY13513 AT4G33000.1 19448033
AT5G35410.1 CDY28278 AT4G33000.1 19448033
AT5G35410.1 CDY45024 AT4G33000.1 19448033
AT5G35410.1 CDX92401 AT5G21274.1 17360592
AT5G35410.1 CDY36813 AT5G35410.1 11402167
AT5G35410.1 CDY44603 AT5G35410.1 11402167
AT5G35410.1 CDY25987 AT5G47100.1 14730064
AT5G35410.1 CDY28977 AT5G47100.1 14730064
AT5G35410.1 CDY40580 AT5G47100.1 14730064
AT5G35410.1 CDY69850 AT5G47100.1 14730064
AT5G35410.1 CDY11963 AT5G55990.1 11402167
AT5G35410.1 CDY36774 AT5G55990.1 11402167
AT5G35410.1 CDY38260 AT5G57050.1 14504388
AT5G35410.1 CDY54381 AT5G57050.1 14504388
AT5G35410.1 CDX84395 AT5G63310.1 17785451
AT5G35410.1 CDY41513 AT5G63310.1 17785451
AT5G35410.1 CDY48138 AT5G63310.1 17785451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44603 Canola cytosol 98.23 98.23
AT5G35410.1 Thale cress cytosol 88.08 89.46
VIT_11s0016g05420.t01 Wine grape cytosol 72.19 73.32
PGSC0003DMT400007475 Potato cytosol 71.96 73.09
Solyc12g009570.1.1 Tomato cytosol 71.08 72.2
KRH03685 Soybean cytosol 69.76 70.85
KRH20252 Soybean cytosol 68.65 69.73
EER90021 Sorghum cytosol 67.11 67.71
Zm00001d000407_P001 Maize plastid 66.23 66.37
TraesCS7A01G377600.1 Wheat mitochondrion 65.12 66.14
Zm00001d036879_P001 Maize cytosol, mitochondrion 65.34 65.92
TraesCS7D01G374400.2 Wheat mitochondrion 64.9 65.92
TraesCS7B01G279300.1 Wheat mitochondrion 64.9 65.92
Os06t0606000-01 Rice cytosol 65.34 65.34
GSMUA_Achr10P... Banana cytosol 66.89 63.66
CDY68878 Canola cytosol, plastid 58.94 59.87
HORVU7Hr1G090260.14 Barley cytosol 66.23 59.41
CDY03449 Canola cytosol 58.72 58.72
CDY16600 Canola cytosol 55.85 57.5
CDX92400 Canola cytosol 55.85 57.37
CDX77058 Canola cytosol, mitochondrion 53.86 55.45
CDY48189 Canola cytosol, mitochondrion 53.86 55.45
CDY26276 Canola mitochondrion 56.29 55.08
CDY63182 Canola mitochondrion 56.29 54.6
CDY09107 Canola cytosol 52.98 54.42
CDX90240 Canola plastid 56.07 53.25
CDY37992 Canola cytosol 46.58 53.02
CDX77603 Canola plastid 56.29 52.9
CDX98191 Canola plastid 56.29 52.8
CDY32442 Canola cytosol 51.66 52.58
CDY15197 Canola cytosol 51.43 52.13
CDX90013 Canola cytosol 51.21 51.9
CDY41846 Canola cytosol 43.93 47.61
CDX93655 Canola cytosol 44.15 47.06
CDY43285 Canola cytosol 44.15 47.06
CDY43284 Canola cytosol 44.15 46.95
CDX75921 Canola cytosol 45.92 46.85
CDX93653 Canola cytosol 43.93 46.82
CDX82366 Canola cytosol 45.47 46.5
CDY23677 Canola cytosol 40.62 46.12
CDX92136 Canola cytosol 44.15 44.84
CDY25896 Canola cytosol 41.06 44.71
CDY68292 Canola nucleus 22.74 44.4
CDX88633 Canola cytosol 39.07 43.07
CDX95849 Canola plasma membrane 44.37 43.04
CDY11858 Canola cytosol 40.18 42.52
CDY49727 Canola cytosol 36.87 42.17
CDY49976 Canola cytosol 29.8 34.62
CDX74283 Canola cytosol 32.23 29.14
CDX97762 Canola cytosol 30.91 28.34
CDX74460 Canola cytosol 30.91 28.34
CDY43267 Canola cytosol 31.57 28.26
CDY37545 Canola cytosol 31.57 28.26
CDY55800 Canola cytosol 31.57 27.98
CDY34697 Canola cytosol 31.57 27.98
CDY04058 Canola cytosol 31.35 27.95
CDX85250 Canola cytosol 31.35 27.73
CDY44405 Canola cytosol 31.35 27.68
CDX86386 Canola cytosol 31.35 27.68
CDX91963 Canola plasma membrane 31.57 11.53
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3MapMan:26.6.1.1.2Gene3D:3.30.200.20Gene3D:3.30.310.80GO:A0A078HIZ2UniProt:A0A078HIZ2
EnsemblPlants:CDY36813ProteinID:CDY36813ProteinID:CDY36813.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00062650001InterPro:IPR000719InterPro:IPR018451
InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343PANTHER:PTHR24343:SF157
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EBBB5F
Description
BnaC04g32060DNon-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078HIZ2]
Coordinates
chrLK032384:-:7298..10478
Molecular Weight (calculated)
51579.6 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.275
Length
453 amino acids
Sequence
(BLAST)
001: MDQKKRIMTK KTRKLGKYEV GRTIGEGSFA KVKFARNTDS GENVAIKIMA KSTILKNKMA DQIKREISTM KIVRHPNIVR LYEVLASPSK IYIVLEFVTG
101: GELFDRIVHK GRLEESEARK YFQQLIDAIA HCHCKGVYHR DLKPENLLLD NNGNLKVSDF GLSALPQQGV ELLRTTCGTP NYAAPEVLNG QGYDGSAADI
201: WSCGVILFVI MAGFLPFSET DLPSLYRKIS AAEFSCPQWF SADVKSLIQR ILDPNPNTRI QIQGIRKDRW FKLNYMPTRA KEEEEVNLDD VRAVFDGIEG
301: SYVAENIERR YEGPLMMNAF EMITLSQGLN LSALFDKRQD FVKRQTRFVS RREPSVIIAN IEAVATSMGF RAHTRNFKTR LEGLSSIKAG QFAVVIEVYE
401: VAPSLFMVDV RKAAGETLEY HKFYKKLCEK LENIIWRATE GMPKPELFRT ITF
Best Arabidopsis Sequence Match ( AT5G35410.1 )
(BLAST)
001: MTKKMRRVGK YEVGRTIGEG TFAKVKFARN TDTGDNVAIK IMAKSTILKN RMVDQIKREI SIMKIVRHPN IVRLYEVLAS PSKIYIVLEF VTGGELFDRI
101: VHKGRLEESE SRKYFQQLVD AVAHCHCKGV YHRDLKPENL LLDTNGNLKV SDFGLSALPQ EGVELLRTTC GTPNYVAPEV LSGQGYDGSA ADIWSCGVIL
201: FVILAGYLPF SETDLPGLYR KINAAEFSCP PWFSAEVKFL IHRILDPNPK TRIQIQGIKK DPWFRLNYVP IRAREEEEVN LDDIRAVFDG IEGSYVAENV
301: ERNDEGPLMM NAFEMITLSQ GLNLSALFDR RQDFVKRQTR FVSRREPSEI IANIEAVANS MGFKSHTRNF KTRLEGLSSI KAGQLAVVIE IYEVAPSLFM
401: VDVRKAAGET LEYHKFYKKL CSKLENIIWR ATEGIPKSEI LRTITF
Arabidopsis Description
CIPK24Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UB05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.