Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86813 | Canola | cytosol | 98.7 | 98.7 |
| CDX90773 | Canola | cytosol | 98.26 | 98.26 |
| CDY68698 | Canola | cytosol | 97.39 | 97.39 |
| CDY25274 | Canola | cytosol | 96.96 | 96.96 |
| CDX94228 | Canola | cytosol | 96.52 | 96.52 |
| AT4G11150.1 | Thale cress | cytosol | 94.35 | 94.35 |
| Bra035248.1-P | Field mustard | cytosol | 84.78 | 89.86 |
| CDY38187 | Canola | cytosol | 81.3 | 78.9 |
| CDY08365 | Canola | cytosol | 81.3 | 77.92 |
| KRH41272 | Soybean | nucleus | 75.65 | 75.0 |
| Solyc08g081910.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 75.22 | 74.89 |
| VIT_02s0025g01000.t01 | Wine grape | cytosol | 74.78 | 74.78 |
| EES01200 | Sorghum | cytosol | 74.78 | 74.78 |
| Zm00001d043991_P001 | Maize | plasma membrane, plastid | 74.35 | 74.35 |
| Os01t0659200-01 | Rice | plasma membrane | 74.35 | 74.35 |
| KRH60001 | Soybean | mitochondrion | 74.78 | 74.14 |
| Zm00001d011504_P003 | Maize | cytosol | 73.91 | 73.91 |
| GSMUA_Achr4P15600_001 | Banana | cytosol | 73.48 | 73.48 |
| GSMUA_Achr4P08420_001 | Banana | cytosol | 73.48 | 73.48 |
| GSMUA_Achr4P00970_001 | Banana | cytosol | 76.09 | 73.22 |
| KRH60005 | Soybean | cytosol, endoplasmic reticulum, nucleus | 74.78 | 73.19 |
| HORVU3Hr1G059320.2 | Barley | vacuole | 72.17 | 73.13 |
| TraesCS3D01G239100.1 | Wheat | cytosol | 72.17 | 73.13 |
| TraesCS3A01G238700.1 | Wheat | cytosol, golgi, nucleus | 72.17 | 73.13 |
| Solyc12g056110.1.1 | Tomato | cytosol | 71.74 | 72.37 |
| PGSC0003DMT400014945 | Potato | cytosol | 75.22 | 71.78 |
| Solyc08g008210.2.1 | Tomato | extracellular, nucleus | 75.22 | 71.78 |
| KRH41277 | Soybean | cytosol, endoplasmic reticulum | 73.91 | 71.43 |
| KRH60006 | Soybean | cytosol, endoplasmic reticulum, nucleus | 73.91 | 71.13 |
| TraesCS3B01G267400.1 | Wheat | cytosol | 71.74 | 69.33 |
| CDY09560 | Canola | cytosol | 70.43 | 68.94 |
| CDY02306 | Canola | cytosol | 70.0 | 68.51 |
| EES00037 | Sorghum | cytosol | 68.26 | 68.26 |
| Zm00001d039330_P001 | Maize | cytosol, plasma membrane | 66.52 | 66.52 |
| TraesCS7A01G408700.1 | Wheat | cytosol | 63.91 | 63.91 |
| Os01t0222500-01 | Rice | plasma membrane | 62.61 | 62.34 |
| Zm00001d017087_P001 | Maize | cytosol | 26.96 | 62.0 |
| TraesCS3A01G146600.2 | Wheat | cytosol | 63.04 | 61.18 |
| TraesCS3D01G155400.2 | Wheat | cytosol | 62.61 | 60.76 |
| TraesCS3B01G173900.2 | Wheat | cytosol | 62.17 | 60.34 |
| VIT_02s0025g00960.t01 | Wine grape | cytosol | 19.13 | 56.41 |
| HORVU3Hr1G029880.8 | Barley | cytosol | 63.04 | 49.83 |
| CDX77585 | Canola | mitochondrion | 27.39 | 36.0 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | GO:A0A078JRB4 | UniProt:A0A078JRB4 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu |
| EnsemblPlants:CDY68201 | ProteinID:CDY68201 | ProteinID:CDY68201.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0033178 | GO:GO:0046961 | EnsemblPlantsGene:GSBRNA2T00072003001 | InterPro:IPR038495 | HAMAP:MF_00311 |
| PFAM:PF01991 | PANTHER:PTHR12317 | PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | UniParc:UPI0004EE08E5 | : |
Description
BnaCnng57990DBnaCnng57990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRB4]
Coordinates
chrLK036975:+:1439..3210
Molecular Weight (calculated)
25875.1 Da
IEP (calculated)
4.871
GRAVY (calculated)
-0.413
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDIDVSNQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSGDEDAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVESILEDAK EEYAGKANVH APEVAVDTTI FLPPPPTSSD PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RRSLFGQVAA
101: LNVSGDEDAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVESILEDAK EEYAGKANVH APEVAVDTTI FLPPPPTSSD PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RRSLFGQVAA
001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA
Arabidopsis Description
VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.