CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039330_P001	Maize	cytosol, plasma membrane	94.78	94.78
Os01t0222500-01	Rice	plasma membrane	80.87	80.52
TraesCS7A01G408700.1	Wheat	cytosol	80.43	80.43
Zm00001d017087_P001	Maize	cytosol	33.91	78.0
TraesCS3A01G146600.2	Wheat	cytosol	78.26	75.95
TraesCS3D01G155400.2	Wheat	cytosol	77.83	75.53
TraesCS3B01G173900.2	Wheat	cytosol	76.96	74.68
VIT_02s0025g01000.t01	Wine grape	cytosol	72.17	72.17
GSMUA_Achr4P08420_001	Banana	cytosol	71.74	71.74
EES01200	Sorghum	cytosol	70.87	70.87
GSMUA_Achr4P15600_001	Banana	cytosol	69.57	69.57
Solyc12g056110.1.1	Tomato	cytosol	68.26	68.86
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	69.13	68.83
GSMUA_Achr4P00970_001	Banana	cytosol	71.3	68.62
CDX86813	Canola	cytosol	68.26	68.26
CDY68201	Canola	cytosol	68.26	68.26
AT4G11150.1	Thale cress	cytosol	67.83	67.83
CDX90773	Canola	cytosol	67.83	67.83
KRH41272	Soybean	nucleus	68.26	67.67
KRH60001	Soybean	mitochondrion	68.26	67.67
CDY68698	Canola	cytosol	67.39	67.39
CDY25274	Canola	cytosol	66.96	66.96
Bra033155.1-P	Field mustard	cytosol	66.96	66.96
PGSC0003DMT400014945	Potato	cytosol	70.0	66.81
Solyc08g008210.2.1	Tomato	extracellular, nucleus	70.0	66.81
Bra027752.1-P	Field mustard	cytosol	68.7	66.67
CDY38187	Canola	cytosol	68.7	66.67
CDX94228	Canola	cytosol	66.52	66.52
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	68.7	66.11
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	67.39	65.96
KRH41277	Soybean	cytosol, endoplasmic reticulum	67.83	65.55
CDY08365	Canola	cytosol	68.26	65.42
AT1G64200.2	Thale cress	cytosol	66.96	64.98
Bra035248.1-P	Field mustard	cytosol	60.87	64.52
HORVU3Hr1G029880.8	Barley	cytosol	80.0	63.23
OQU78193	Sorghum	cytosol	60.87	60.61
Bra000737.1-P	Field mustard	cytosol	65.65	35.03

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	EntrezGene:8079484	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	UniProt:C5XKC8
ncoils:Coil	EnsemblPlants:EES00037	ProteinID:EES00037	ProteinID:EES00037.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020
GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF21	EnsemblPlantsGene:SORBI_3003G013700	SUPFAM:SSF160527	unigene:Sbi.6068	UniParc:UPI0001A84A3E
RefSeq:XP_002454917.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1220251..1223208

Molecular Weight (calculated)

26206.8 Da

IEP (calculated)

7.385

GRAVY (calculated)

-0.339

Length

230 amino acids

Sequence
(BLAST)

001: MEDVDVSRQL KQMTDFIRQE AVEKAVEIEA AAAEEFQIEK LQLVEAEKKK IRQEYDRKEK QVGIKKKIDY SMQLNASRIK VLQAQDDLVT DMLESARKDL
101: LCISRDHQTY KKLLKILIVQ SLLRLKEPAV LLRCRKEDLE LVDSVLESAS NEYADKANVY PPEIVVDRHI FLPSAPSHYQ APGPSCSGGV VLASRDGKIV
201: CENTLDARLQ VVFRKKLPEI RQSLFVQVAA

Best Arabidopsis Sequence Match ( AT1G64200.1 )
(BLAST)

001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA

Arabidopsis Description

VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.