CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043991_P001	Maize	plasma membrane, plastid	98.26	98.26
Zm00001d011504_P003	Maize	cytosol	96.96	96.96
Os01t0659200-01	Rice	plasma membrane	89.57	89.57
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	88.26	89.43
TraesCS3D01G239100.1	Wheat	cytosol	87.83	88.99
HORVU3Hr1G059320.2	Barley	vacuole	87.83	88.99
TraesCS3B01G267400.1	Wheat	cytosol	86.52	83.61
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	78.26	77.92
Solyc12g056110.1.1	Tomato	cytosol	76.96	77.63
KRH60001	Soybean	mitochondrion	78.26	77.59
KRH41272	Soybean	nucleus	77.83	77.16
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	78.26	76.6
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	78.7	75.73
KRH41277	Soybean	cytosol, endoplasmic reticulum	78.26	75.63
Solyc08g008210.2.1	Tomato	extracellular, nucleus	79.13	75.52
CDY38187	Canola	cytosol	77.39	75.11
Bra027752.1-P	Field mustard	cytosol	77.39	75.11
PGSC0003DMT400014945	Potato	cytosol	78.7	75.1
CDY68201	Canola	cytosol	74.78	74.78
CDX86813	Canola	cytosol	74.78	74.78
AT4G11150.1	Thale cress	cytosol	74.35	74.35
CDX90773	Canola	cytosol	74.35	74.35
CDY68698	Canola	cytosol	74.35	74.35
CDY08365	Canola	cytosol	76.96	73.75
CDY25274	Canola	cytosol	73.48	73.48
Bra033155.1-P	Field mustard	cytosol	73.48	73.48
CDX94228	Canola	cytosol	73.04	73.04
AT1G64200.2	Thale cress	cytosol	73.91	71.73
Bra035248.1-P	Field mustard	cytosol	67.39	71.43
EES00037	Sorghum	cytosol	70.87	70.87
OQU78193	Sorghum	cytosol	66.96	66.67
VIT_02s0025g00960.t01	Wine grape	cytosol	22.61	66.67
Bra000737.1-P	Field mustard	cytosol	72.61	38.75

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	EntrezGene:8060126	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	UniProt:C5XFB9
ncoils:Coil	EnsemblPlants:EES01200	ProteinID:EES01200	ProteinID:EES01200.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020
GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	EnsemblPlantsGene:SORBI_3003G244200	SUPFAM:SSF160527	unigene:Sbi.1546	UniParc:UPI0001A84555
RefSeq:XP_002456080.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:58340824..58348613

Molecular Weight (calculated)

26581.1 Da

IEP (calculated)

7.210

GRAVY (calculated)

-0.561

Length

230 amino acids

Sequence
(BLAST)

001: MNDTDVAKQI QQMVRFIRQE ADEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVEVRKKIEY SMQLNASRIK VLQAQDDLVN KMKDDAMKEL
101: LLVSHNHHEY KNLLKDLIVQ GLLRLKEPAV LLRCRKEDHH HVESVLHSAK HEYASKADVH EPEIIVDHVV YLPPAPSHHD AHGQFCSGGV VLASRDGKIV
201: FESTLDARLE VVFRKKLPEI RKLLFGQTAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.