Factsheet for Zm00001d043991_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
nucleus: 24677780
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 24677780 doi

B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni

State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011504_P003	Maize	cytosol	98.7	98.7
EES01200	Sorghum	cytosol	98.26	98.26
Os01t0659200-01	Rice	plasma membrane	90.0	90.0
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	87.39	88.55
TraesCS3D01G239100.1	Wheat	cytosol	86.96	88.11
HORVU3Hr1G059320.2	Barley	vacuole	86.96	88.11
TraesCS3B01G267400.1	Wheat	cytosol	85.65	82.77
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	77.83	77.49
KRH60001	Soybean	mitochondrion	77.83	77.16
Solyc12g056110.1.1	Tomato	cytosol	76.09	76.75
KRH41272	Soybean	nucleus	77.39	76.72
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	77.83	76.17
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	78.26	75.31
KRH41277	Soybean	cytosol, endoplasmic reticulum	77.83	75.21
CDY38187	Canola	cytosol	77.39	75.11
Bra027752.1-P	Field mustard	cytosol	77.39	75.11
Solyc08g008210.2.1	Tomato	extracellular, nucleus	78.7	75.1
PGSC0003DMT400014945	Potato	cytosol	78.26	74.69
CDY68201	Canola	cytosol	74.35	74.35
CDX86813	Canola	cytosol	74.35	74.35
AT4G11150.1	Thale cress	cytosol	73.91	73.91
CDY68698	Canola	cytosol	73.91	73.91
CDX90773	Canola	cytosol	73.91	73.91
CDY08365	Canola	cytosol	76.96	73.75
CDY25274	Canola	cytosol	73.04	73.04
Bra033155.1-P	Field mustard	cytosol	73.04	73.04
CDX94228	Canola	cytosol	72.61	72.61
AT1G64200.2	Thale cress	cytosol	73.91	71.73
Zm00001d039330_P001	Maize	cytosol, plasma membrane	70.87	70.87
Bra035248.1-P	Field mustard	cytosol	66.52	70.51
VIT_02s0025g00960.t01	Wine grape	cytosol	22.17	65.38
Zm00001d038490_P001	Maize	cytosol	65.65	65.37
Zm00001d017087_P001	Maize	cytosol	27.39	63.0
Bra000737.1-P	Field mustard	cytosol	72.17	38.52

Protein Annotations

EntrezGene:103651402	MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	UniProt:B6T2T0
EMBL:BT062805	ncoils:Coil	EMBL:EU959295	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787
GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311	ProteinID:ONM39631.1	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI000182C962	EnsemblPlantsGene:Zm00001d043991	EnsemblPlants:Zm00001d043991_P001
EnsemblPlants:Zm00001d043991_T001	SEG:seg	:	:	:	:

Description

DNA binding activity2 DNA binding activity2

Coordinates

chr3:-:215828080..215837379

Molecular Weight (calculated)

26615.0 Da

IEP (calculated)

7.013

GRAVY (calculated)

-0.590

Length

230 amino acids

Sequence
(BLAST)

001: MNDADVAKQI QQMVRFIRQE ADEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVEVRKKIEY SMQLNASRIK VLQAQDDLVN KMKDDAMKEL
101: LLVSHNHHEY KNLLKDLIVQ GLLRLKEPAV LLRCRKEDHH HVESVLHSAK HEYASKADVH EPEIFVDHDV YLPPAPSHHD AHGQFCSGGI VLASRDGKIV
201: FESTLDARLE VVFRKKLPEI RKLLFGQTAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.