Factsheet for Zm00001d038490_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78193	Sorghum	cytosol	96.1	96.1
Os05t0480700-01	Rice	plasma membrane	84.42	84.42
TraesCS1B01G312000.1	Wheat	cytosol	79.22	79.22
HORVU0Hr1G025810.2	Barley	cytosol	79.22	78.88
HORVU1Hr1G069480.1	Barley	cytosol	79.22	78.88
TraesCS1D01G301600.1	Wheat	cytosol	78.36	78.36
VIT_08s0056g00620.t01	Wine grape	cytosol	71.0	71.3
Solyc09g048990.2.1	Tomato	unclear	38.1	70.97
PGSC0003DMT400010366	Potato	cytosol	68.4	70.85
TraesCS1A01G302200.2	Wheat	cytosol	79.22	67.78
Zm00001d043991_P001	Maize	plasma membrane, plastid	65.37	65.65
CDY02306	Canola	cytosol	66.67	65.53
Bra032402.1-P	Field mustard	cytosol	66.67	65.53
KRH24417	Soybean	cytosol	64.5	65.35
Zm00001d011504_P003	Maize	cytosol	64.94	65.22
CDY09560	Canola	cytosol	66.23	65.11
AT3G08560.1	Thale cress	cytosol, nucleus, peroxisome	66.23	65.11
KRH29400	Soybean	cytosol	65.8	64.41
Zm00001d039330_P001	Maize	cytosol, plasma membrane	61.47	61.74
Zm00001d017087_P001	Maize	cytosol	22.94	53.0
CDX77585	Canola	mitochondrion	24.24	32.0

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	UniProt:A0A1D6M6N9	ProteinID:AQK86741.1	ProteinID:AQK86742.1	InterPro:ATPase_E_C
InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150
GO:GO:0015991	GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495
HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI000220B4D5
EnsemblPlantsGene:Zm00001d038490	EnsemblPlants:Zm00001d038490_P001	EnsemblPlants:Zm00001d038490_T001	SEG:seg	:	:

Description

GNAT-transcription factor 30V-type proton ATPase subunit E2

Coordinates

chr6:+:158527082..158528668

Molecular Weight (calculated)

26122.6 Da

IEP (calculated)

9.865

GRAVY (calculated)

-0.477

Length

231 amino acids

Sequence
(BLAST)

001: MNDADVGKQV QQMVRFILQE ADEKASEISV AAEEEFSIEK LQLVESEKRR VRQEYERKEK QVDVRRKIEY STELNAARIK LLRAQDDVVT GMKESAGDAL
101: LRVTKDANAY KRVLKGLIVQ SLLRLREPAL VLRCREADRS LVEAVLEVAK KEYAEKAKVN LPKIIIDGKV YLPPQRTSRD AHGPSCSGGV VLASQDGKIV
201: CDNTLDARLS VSFRQKLPEI RKKLFSQRVS S

Best Arabidopsis Sequence Match ( AT3G08560.1 )
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIER LQLLESAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT AMKDSAAKDL
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA

Arabidopsis Description

VHA-E2VHA-E2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP35]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.