Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G069480.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS1B01G312000.1 | Wheat | cytosol | 95.26 | 95.67 |
| TraesCS1D01G301600.1 | Wheat | cytosol | 94.83 | 95.24 |
| TraesCS1A01G302200.2 | Wheat | cytosol | 94.4 | 81.11 |
| Os05t0480700-01 | Rice | plasma membrane | 79.74 | 80.09 |
| Zm00001d038490_P001 | Maize | cytosol | 78.88 | 79.22 |
| OQU78193 | Sorghum | cytosol | 77.59 | 77.92 |
| VIT_08s0056g00620.t01 | Wine grape | cytosol | 69.4 | 70.0 |
| Solyc09g048990.2.1 | Tomato | unclear | 37.07 | 69.35 |
| KRH24417 | Soybean | cytosol | 65.95 | 67.11 |
| PGSC0003DMT400010366 | Potato | cytosol | 63.79 | 66.37 |
| AT3G08560.1 | Thale cress | cytosol, nucleus, peroxisome | 66.38 | 65.53 |
| KRH29400 | Soybean | cytosol | 66.38 | 65.25 |
| CDY09560 | Canola | cytosol | 65.52 | 64.68 |
| CDY02306 | Canola | cytosol | 65.52 | 64.68 |
| Bra032402.1-P | Field mustard | cytosol | 65.52 | 64.68 |
| HORVU3Hr1G059320.2 | Barley | vacuole | 62.07 | 63.44 |
| HORVU3Hr1G029880.8 | Barley | cytosol | 56.9 | 45.36 |
| CDX77585 | Canola | mitochondrion | 24.14 | 32.0 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0033178 | GO:GO:0046961 | EnsemblPlantsGene:HORVU0Hr1G025810 | EnsemblPlants:HORVU0Hr1G025810.2 |
| InterPro:IPR038495 | UniProt:M0Y7W5 | HAMAP:MF_00311 | PFAM:PF01991 | PANTHER:PTHR12317 | PANTHER:PTHR12317:SF54 |
| SUPFAM:SSF160527 | UniParc:UPI000295F01A | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:133996765..133999418
Molecular Weight (calculated)
26506.2 Da
IEP (calculated)
9.168
GRAVY (calculated)
-0.541
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDADVGKQI QQMVRFIQQE AQEKASEISV AAEEDFNIEK LQLVESEKRK IKQEYERKQK QVDIRRKIDY SMELNAARIK VLQAQDDIVG EMKENACKAL
101: LRVTKDTNVY RKILKSLIVQ SLLRLRESSV VLRCREADRV HVEPVLEAAK KEYAEKLKVN LPKIIIDGKV HLPPQRINDT AHGPACSGGV VLASQDGKIV
201: CDNTLDTRVD VCFRQKLPEI RKKLYGDQQV SP
101: LRVTKDTNVY RKILKSLIVQ SLLRLRESSV VLRCREADRV HVEPVLEAAK KEYAEKLKVN LPKIIIDGKV HLPPQRINDT AHGPACSGGV VLASQDGKIV
201: CDNTLDTRVD VCFRQKLPEI RKKLYGDQQV SP
001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIER LQLLESAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT AMKDSAAKDL
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA
Arabidopsis Description
VHA-E2VHA-E2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP35]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.