Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G301600.1 | Wheat | cytosol | 98.7 | 98.7 |
| HORVU0Hr1G025810.2 | Barley | cytosol | 95.67 | 95.26 |
| HORVU1Hr1G069480.1 | Barley | cytosol | 95.67 | 95.26 |
| TraesCS1A01G302200.2 | Wheat | cytosol | 98.27 | 84.07 |
| Os05t0480700-01 | Rice | plasma membrane | 80.95 | 80.95 |
| Zm00001d038490_P001 | Maize | cytosol | 79.22 | 79.22 |
| OQU78193 | Sorghum | cytosol | 78.36 | 78.36 |
| VIT_08s0056g00620.t01 | Wine grape | cytosol | 69.7 | 70.0 |
| Solyc09g048990.2.1 | Tomato | unclear | 36.8 | 68.55 |
| KRH24417 | Soybean | cytosol | 66.67 | 67.54 |
| PGSC0003DMT400010366 | Potato | cytosol | 63.64 | 65.92 |
| KRH29400 | Soybean | cytosol | 67.1 | 65.68 |
| AT3G08560.1 | Thale cress | cytosol, nucleus, peroxisome | 65.8 | 64.68 |
| CDY09560 | Canola | cytosol | 64.94 | 63.83 |
| CDY02306 | Canola | cytosol | 64.94 | 63.83 |
| Bra032402.1-P | Field mustard | cytosol | 64.94 | 63.83 |
| TraesCS3B01G267400.1 | Wheat | cytosol | 60.61 | 58.82 |
| TraesCS3B01G173900.2 | Wheat | cytosol | 54.98 | 53.59 |
| CDX77585 | Canola | mitochondrion | 22.94 | 30.29 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0033178 | GO:GO:0046961 | InterPro:IPR038495 | HAMAP:MF_00311 | PFAM:PF01991 | PANTHER:PTHR12317 |
| PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | EnsemblPlantsGene:TraesCS1B01G312000 | EnsemblPlants:TraesCS1B01G312000.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:+:535689883..535691111
Molecular Weight (calculated)
26436.1 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.565
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDADVGKQI QQMVRFIQQE AQEKASEISV AAEEDFNIEK LQLVESEKRK IRQEYERKQK QVDIRRKIEY SMELNAARIK VLQAQEDIVG EMKENASKTL
101: VRVTKDTNVY RKILKSLIVQ SLLRLRESSV VLRCREADRV HVEPVLEAAK KEYAEKLKVN LPKIIIDGKV HLPPQRANDA AHGPACSGGV VLASQDGKIV
201: CDNTLDTRVD VCFRQKLPEI RKKLYSQQVS Q
101: VRVTKDTNVY RKILKSLIVQ SLLRLRESSV VLRCREADRV HVEPVLEAAK KEYAEKLKVN LPKIIIDGKV HLPPQRANDA AHGPACSGGV VLASQDGKIV
201: CDNTLDTRVD VCFRQKLPEI RKKLYSQQVS Q
001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIER LQLLESAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT AMKDSAAKDL
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA
Arabidopsis Description
VHA-E2VHA-E2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP35]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.