Factsheet for TraesCS3B01G267400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	92.44	96.92
TraesCS3D01G239100.1	Wheat	cytosol	91.6	96.04
HORVU3Hr1G059320.2	Barley	vacuole	91.18	95.59
EES01200	Sorghum	cytosol	83.61	86.52
Zm00001d043991_P001	Maize	plasma membrane, plastid	82.77	85.65
Os01t0659200-01	Rice	plasma membrane	82.77	85.65
Zm00001d011504_P003	Maize	cytosol	82.35	85.22
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	74.79	77.06
Solyc12g056110.1.1	Tomato	cytosol	72.69	75.88
Solyc08g008210.2.1	Tomato	extracellular, nucleus	75.63	74.69
PGSC0003DMT400014945	Potato	cytosol	75.21	74.27
KRH41272	Soybean	nucleus	72.27	74.14
KRH60001	Soybean	mitochondrion	71.85	73.71
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	72.69	73.62
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	73.11	72.8
CDY38187	Canola	cytosol	72.27	72.57
Bra027752.1-P	Field mustard	cytosol	72.27	72.57
CDY68201	Canola	cytosol	69.33	71.74
AT4G11150.1	Thale cress	cytosol	69.33	71.74
KRH41277	Soybean	cytosol, endoplasmic reticulum	71.43	71.43
CDY68698	Canola	cytosol	68.91	71.3
CDX86813	Canola	cytosol	68.91	71.3
CDX90773	Canola	cytosol	68.91	71.3
CDY08365	Canola	cytosol	71.85	71.25
AT1G64200.2	Thale cress	cytosol	70.59	70.89
Bra033155.1-P	Field mustard	cytosol	68.07	70.43
CDY25274	Canola	cytosol	68.07	70.43
CDX94228	Canola	cytosol	67.65	70.0
Bra035248.1-P	Field mustard	cytosol	62.18	68.2
TraesCS3B01G173900.2	Wheat	cytosol	64.29	64.56
VIT_02s0025g00960.t01	Wine grape	cytosol	20.59	62.82
TraesCS1B01G312000.1	Wheat	cytosol	58.82	60.61
Bra000737.1-P	Field mustard	cytosol	68.49	37.82

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311
PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	EnsemblPlantsGene:TraesCS3B01G267400	EnsemblPlants:TraesCS3B01G267400.1

Description

No Description!

Coordinates

chr3B:+:429271885..429275024

Molecular Weight (calculated)

27397.9 Da

IEP (calculated)

6.190

GRAVY (calculated)

-0.571

Length

238 amino acids

Sequence
(BLAST)

001: MNDTDVSKQI QQMVRFIRQE AEEKAGEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVDVRKKIEY SMQLNASRIK VLQAQDDLVN KMKEDAMKEL
101: LNISSNHHEY KNLLKELVVQ GLLRLKEPAV LLRCRKEDHH NVESVLHSAK NEYASKADVH EPEILVDHSV YLPPSPSHGD EHGQICHGGV VLASRDGKIV
201: FENTVDARLE VVFRKKLPEI SFSASMNLIE AVLQMVYD

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.