Factsheet for TraesCS3B01G173900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G408700.1	Wheat	cytosol	91.56	94.35
TraesCS3D01G155400.2	Wheat	cytosol	93.25	93.25
Os01t0222500-01	Rice	plasma membrane	75.11	77.06
EES00037	Sorghum	cytosol	74.68	76.96
Zm00001d039330_P001	Maize	cytosol, plasma membrane	73.0	75.22
HORVU3Hr1G029880.8	Barley	cytosol	90.72	73.88
VIT_02s0025g01000.t01	Wine grape	cytosol	67.51	69.57
Zm00001d017087_P001	Maize	cytosol	28.69	68.0
GSMUA_Achr4P08420_001	Banana	cytosol	65.4	67.39
Solyc12g056110.1.1	Tomato	cytosol	63.71	66.23
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	64.14	65.8
KRH41272	Soybean	nucleus	63.71	65.09
KRH60001	Soybean	mitochondrion	63.71	65.09
GSMUA_Achr4P00970_001	Banana	cytosol	65.4	64.85
GSMUA_Achr4P15600_001	Banana	cytosol	62.45	64.35
TraesCS3B01G267400.1	Wheat	cytosol	64.56	64.29
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	63.29	63.83
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	63.71	63.18
Solyc08g008210.2.1	Tomato	extracellular, nucleus	64.14	63.07
PGSC0003DMT400014945	Potato	cytosol	64.14	63.07
KRH41277	Soybean	cytosol, endoplasmic reticulum	63.29	63.03
AT4G11150.1	Thale cress	cytosol	60.34	62.17
CDY68201	Canola	cytosol	60.34	62.17
CDX90773	Canola	cytosol	59.92	61.74
CDX86813	Canola	cytosol	59.92	61.74
Bra033155.1-P	Field mustard	cytosol	59.49	61.3
CDY68698	Canola	cytosol	59.49	61.3
CDY25274	Canola	cytosol	59.49	61.3
CDX94228	Canola	cytosol	59.49	61.3
CDY38187	Canola	cytosol	60.34	60.34
Bra027752.1-P	Field mustard	cytosol	60.34	60.34
AT1G64200.2	Thale cress	cytosol	59.92	59.92
CDY08365	Canola	cytosol	59.92	59.17
Bra035248.1-P	Field mustard	cytosol	53.16	58.06
TraesCS1B01G312000.1	Wheat	cytosol	53.59	54.98
Bra000737.1-P	Field mustard	cytosol	59.92	32.95

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311
PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF21	SUPFAM:SSF160527	EnsemblPlantsGene:TraesCS3B01G173900	EnsemblPlants:TraesCS3B01G173900.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:174200236..174202988

Molecular Weight (calculated)

27418.9 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.555

Length

237 amino acids

Sequence
(BLAST)

001: MDEGNVAQQL KQMTDFIRLE AVEKAFEIEA AAAEEFQIEK LQLVEAEKKK IRQDYEKKEK QVAIKKKIEY SMQLNASRIE VLQAQDDLVK SMMDSARKEL
101: LYQSRDHQSY KKLLRILIVQ SLLRLKESAV ILRCRKEDLE LVESVLESAR NEYAEKENVY PPEIMVDHHV YLPPAPSHYK EHDLSCSGGV VMASQDGKIV
201: FENTLDARLE VVFRKKLPEG EEPFVTDDSR LNYATQA

Best Arabidopsis Sequence Match ( AT1G64200.1 )
(BLAST)

001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA

Arabidopsis Description

VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.