Factsheet for GSMUA_Achr4P08420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P15600_001	Banana	cytosol	89.13	89.13
VIT_02s0025g01000.t01	Wine grape	cytosol	85.65	85.65
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	83.04	82.68
Solyc12g056110.1.1	Tomato	cytosol	80.43	81.14
GSMUA_Achr4P00970_001	Banana	cytosol	83.48	80.33
KRH60001	Soybean	mitochondrion	80.87	80.17
KRH41272	Soybean	nucleus	80.43	79.74
Solyc08g008210.2.1	Tomato	extracellular, nucleus	83.48	79.67
PGSC0003DMT400014945	Potato	cytosol	83.48	79.67
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	80.0	78.3
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	80.43	77.41
KRH41277	Soybean	cytosol, endoplasmic reticulum	79.57	76.89
AT4G11150.1	Thale cress	cytosol	73.91	73.91
CDY68201	Canola	cytosol	73.48	73.48
CDY38187	Canola	cytosol	75.65	73.42
Bra027752.1-P	Field mustard	cytosol	75.65	73.42
CDX90773	Canola	cytosol	73.04	73.04
CDX86813	Canola	cytosol	73.04	73.04
CDY68698	Canola	cytosol	72.61	72.61
CDY25274	Canola	cytosol	72.17	72.17
Bra033155.1-P	Field mustard	cytosol	72.17	72.17
CDY08365	Canola	cytosol	75.22	72.08
EES00037	Sorghum	cytosol	71.74	71.74
CDX94228	Canola	cytosol	71.74	71.74
AT1G64200.2	Thale cress	cytosol	73.04	70.89
Zm00001d039330_P001	Maize	cytosol, plasma membrane	70.87	70.87
Bra035248.1-P	Field mustard	cytosol	64.78	68.66
Os01t0222500-01	Rice	plasma membrane	68.7	68.4
TraesCS7A01G408700.1	Wheat	cytosol	66.96	66.96
TraesCS3A01G146600.2	Wheat	cytosol	67.83	65.82
TraesCS3B01G173900.2	Wheat	cytosol	67.39	65.4
TraesCS3D01G155400.2	Wheat	cytosol	67.39	65.4
Zm00001d017087_P001	Maize	cytosol	27.39	63.0
HORVU3Hr1G029880.8	Barley	cytosol	67.83	53.61
Bra000737.1-P	Field mustard	cytosol	72.17	38.52

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	EnsemblPlantsGene:GSMUA_Achr4G08420_001	EnsemblPlants:GSMUA_Achr4P08420_001
EnsemblPlants:GSMUA_Achr4T08420_001	InterPro:IPR038495	UniProt:M0SM59	HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317
PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI000295A796	:	:	:

Description

V-type proton ATPase subunit E [Source:GMGC_GENE;Acc:GSMUA_Achr4G08420_001]

Coordinates

chr4:-:6194408..6199567

Molecular Weight (calculated)

26307.0 Da

IEP (calculated)

7.555

GRAVY (calculated)

-0.417

Length

230 amino acids

Sequence
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISV AAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVEIRKKIEY SMQLNASRIE VLQAQDDLVS SMKEAAAKEL
101: LLVSVNQKAY QKLLKELIVQ SLLRLKEPAV LLRCRKDDLH LVESVLNPAK EEYTKKANVH PPEIVVDNKT FLPPAPSHHN AHGPYCSGGV VLASIDGKIV
201: CENTLDARLD VVFRKKLPEI RKLLFDQVIA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.