Factsheet for Bra027752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38187	Canola	cytosol	99.58	99.58
CDY08365	Canola	cytosol	99.58	98.33
AT1G64200.2	Thale cress	cytosol	89.03	89.03
Bra033155.1-P	Field mustard	cytosol	78.06	80.43
Os01t0659200-01	Rice	plasma membrane	76.79	79.13
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	76.37	78.36
VIT_02s0025g01000.t01	Wine grape	cytosol	75.53	77.83
Zm00001d043991_P001	Maize	plasma membrane, plastid	75.11	77.39
EES01200	Sorghum	cytosol	75.11	77.39
Solyc12g056110.1.1	Tomato	cytosol	74.26	77.19
KRH60001	Soybean	mitochondrion	75.53	77.16
GSMUA_Achr4P00970_001	Banana	cytosol	77.64	76.99
Zm00001d011504_P003	Maize	cytosol	74.68	76.96
KRH41272	Soybean	nucleus	75.11	76.72
Bra035248.1-P	Field mustard	cytosol	70.04	76.5
Solyc08g008210.2.1	Tomato	extracellular, nucleus	77.64	76.35
PGSC0003DMT400014945	Potato	cytosol	77.22	75.93
HORVU3Hr1G059320.2	Barley	vacuole	72.57	75.77
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	72.57	75.77
GSMUA_Achr4P08420_001	Banana	cytosol	73.42	75.65
TraesCS3D01G239100.1	Wheat	cytosol	72.15	75.33
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	74.68	75.32
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	75.53	74.9
KRH41277	Soybean	cytosol, endoplasmic reticulum	74.68	74.37
GSMUA_Achr4P15600_001	Banana	cytosol	71.31	73.48
TraesCS3B01G267400.1	Wheat	cytosol	72.57	72.27
EES00037	Sorghum	cytosol	66.67	68.7
Zm00001d039330_P001	Maize	cytosol, plasma membrane	66.24	68.26
Bra032402.1-P	Field mustard	cytosol	63.71	64.26
TraesCS7A01G408700.1	Wheat	cytosol	61.6	63.48
Os01t0222500-01	Rice	plasma membrane	61.6	63.2
TraesCS3A01G146600.2	Wheat	cytosol	61.18	61.18
TraesCS3D01G155400.2	Wheat	cytosol	60.76	60.76
TraesCS3B01G173900.2	Wheat	cytosol	60.34	60.34
VIT_02s0025g00960.t01	Wine grape	cytosol	19.83	60.26
Zm00001d017087_P001	Maize	cytosol	24.89	59.0
HORVU3Hr1G029880.8	Barley	cytosol	62.45	50.86
Bra000737.1-P	Field mustard	cytosol	76.79	42.23

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	EnsemblPlantsGene:Bra027752	EnsemblPlants:Bra027752.1
EnsemblPlants:Bra027752.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787	GO:GO:0033178
GO:GO:0046961	InterPro:IPR038495	UniProt:M4EG39	HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317
PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI000254227E	SEG:seg	:	:

Description

AT1G64200 (E=1e-112) VHA-E3 | VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3); proton-transporting ATPase, rotational mechanism

Coordinates

chrA09:-:6475214..6476601

Molecular Weight (calculated)

27275.9 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.532

Length

237 amino acids

Sequence
(BLAST)

001: MNDADVSKQI EQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRRKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSEHGFFN HHHHQYKHLL KHLIVQCLLR LKEPSVLLRC RKEDLHIVES MLDDATEEYC EKAKVHAPEI IVDKDIFLPP APSEDDPHAP FCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR KKLPEIRKSL FGQVGAA

Best Arabidopsis Sequence Match ( AT1G64200.1 )
(BLAST)

001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA

Arabidopsis Description

VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.