Factsheet for TraesCS3D01G239100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	99.12	99.12
HORVU3Hr1G059320.2	Barley	vacuole	97.8	97.8
TraesCS3B01G267400.1	Wheat	cytosol	96.04	91.6
EES01200	Sorghum	cytosol	88.99	87.83
Zm00001d043991_P001	Maize	plasma membrane, plastid	88.11	86.96
Os01t0659200-01	Rice	plasma membrane	88.11	86.96
Zm00001d011504_P003	Maize	cytosol	87.67	86.52
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	77.09	75.76
Solyc12g056110.1.1	Tomato	cytosol	74.89	74.56
KRH41272	Soybean	nucleus	75.77	74.14
KRH60001	Soybean	mitochondrion	75.33	73.71
Solyc08g008210.2.1	Tomato	extracellular, nucleus	77.97	73.44
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	75.77	73.19
PGSC0003DMT400014945	Potato	cytosol	77.53	73.03
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	76.21	72.38
CDY68201	Canola	cytosol	73.13	72.17
CDY38187	Canola	cytosol	75.33	72.15
Bra027752.1-P	Field mustard	cytosol	75.33	72.15
KRH41277	Soybean	cytosol, endoplasmic reticulum	75.33	71.85
CDX90773	Canola	cytosol	72.69	71.74
CDX86813	Canola	cytosol	72.69	71.74
CDY68698	Canola	cytosol	72.69	71.74
AT4G11150.1	Thale cress	cytosol	72.25	71.3
CDY25274	Canola	cytosol	71.81	70.87
Bra033155.1-P	Field mustard	cytosol	71.81	70.87
CDY08365	Canola	cytosol	74.89	70.83
CDX94228	Canola	cytosol	71.37	70.43
AT1G64200.2	Thale cress	cytosol	73.13	70.04
Bra035248.1-P	Field mustard	cytosol	64.76	67.74
TraesCS3D01G155400.2	Wheat	cytosol	66.52	63.71
TraesCS1D01G301600.1	Wheat	cytosol	63.0	61.9
VIT_02s0025g00960.t01	Wine grape	cytosol	21.15	61.54
Bra000737.1-P	Field mustard	cytosol	71.81	37.82

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311
PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	EnsemblPlantsGene:TraesCS3D01G239100	EnsemblPlants:TraesCS3D01G239100.1

Description

No Description!

Coordinates

chr3D:+:330637776..330642195

Molecular Weight (calculated)

26209.5 Da

IEP (calculated)

6.866

GRAVY (calculated)

-0.636

Length

227 amino acids

Sequence
(BLAST)

001: MNDTDVSKQI QQMVRFIRQE AEEKAGEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVDVRKKIEY SMQLNASRIK VLQAQDDLVN KMKEDAMKEL
101: LNISSNHHEY RNLLKELVVQ GLLRLKEPAV LLRCRKEDHH NVESVMHSAK NEYASKADVH EPEILVDHTV YLPPSPSHGD EHGQICHGGV VLASRDGKIV
201: FENTVDARLE VVFRKKLPEI RKLLVAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.