Factsheet for Bra035248.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 2
golgi 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86813	Canola	cytosol	90.32	85.22
CDY68201	Canola	cytosol	89.86	84.78
Bra033155.1-P	Field mustard	cytosol	87.1	82.17
AT4G11150.1	Thale cress	cytosol	86.18	81.3
Bra027752.1-P	Field mustard	cytosol	76.5	70.04
KRH41272	Soybean	nucleus	72.35	67.67
EES01200	Sorghum	cytosol	71.43	67.39
VIT_02s0025g01000.t01	Wine grape	cytosol	70.97	66.96
KRH60001	Soybean	mitochondrion	71.43	66.81
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	70.97	66.67
Zm00001d043991_P001	Maize	plasma membrane, plastid	70.51	66.52
Os01t0659200-01	Rice	plasma membrane	70.51	66.52
Zm00001d011504_P003	Maize	cytosol	70.05	66.09
GSMUA_Achr4P00970_001	Banana	cytosol	72.35	65.69
GSMUA_Achr4P15600_001	Banana	cytosol	69.59	65.65
HORVU3Hr1G059320.2	Barley	vacuole	68.2	65.2
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	68.2	65.2
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	70.51	65.11
Solyc12g056110.1.1	Tomato	cytosol	68.2	64.91
GSMUA_Achr4P08420_001	Banana	cytosol	68.66	64.78
TraesCS3D01G239100.1	Wheat	cytosol	67.74	64.76
Solyc08g008210.2.1	Tomato	extracellular, nucleus	71.43	64.32
PGSC0003DMT400014945	Potato	cytosol	70.97	63.9
KRH41277	Soybean	cytosol, endoplasmic reticulum	70.05	63.87
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	69.59	63.18
TraesCS3B01G267400.1	Wheat	cytosol	68.2	62.18
Bra032402.1-P	Field mustard	cytosol	67.28	62.13
EES00037	Sorghum	cytosol	64.52	60.87
Zm00001d039330_P001	Maize	cytosol, plasma membrane	63.59	60.0
TraesCS7A01G408700.1	Wheat	cytosol	59.91	56.52
Zm00001d017087_P001	Maize	cytosol	25.35	55.0
Os01t0222500-01	Rice	plasma membrane	58.06	54.55
TraesCS3A01G146600.2	Wheat	cytosol	58.99	54.01
TraesCS3D01G155400.2	Wheat	cytosol	58.53	53.59
TraesCS3B01G173900.2	Wheat	cytosol	58.06	53.16
HORVU3Hr1G029880.8	Barley	cytosol	58.99	43.99
Bra000737.1-P	Field mustard	cytosol	85.71	43.16
VIT_02s0025g00960.t01	Wine grape	cytosol	14.75	41.03

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	EnsemblPlantsGene:Bra035248	EnsemblPlants:Bra035248.1
EnsemblPlants:Bra035248.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	UniProt:M4F2F0	HAMAP:MF_00311	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	TMHMM:TMhelix	UniParc:UPI0002546B1F	SEG:seg

Description

AT1G64200 (E=3e-082) VHA-E3 | VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3); proton-transporting ATPase, rotational mechanism

Coordinates

chrA08:-:9577981..9579226

Molecular Weight (calculated)

24730.0 Da

IEP (calculated)

4.844

GRAVY (calculated)

-0.296

Length

217 amino acids

Sequence
(BLAST)

001: MNDVDVSNQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNSSRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSGDEDAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG FVESILEDAK EEYAGRTPPS SFPLLLLLVI LMVSTGVVLA SRDGKIVCEN TLDARLDVAF
201: RMKLPVIRRS LFGQIAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.