Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g081910.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 88.6 | 87.45 |
| Solyc08g008210.2.1 | Tomato | extracellular, nucleus | 88.16 | 83.4 |
| VIT_02s0025g01000.t01 | Wine grape | cytosol | 83.77 | 83.04 |
| GSMUA_Achr4P08420_001 | Banana | cytosol | 81.14 | 80.43 |
| GSMUA_Achr4P15600_001 | Banana | cytosol | 79.39 | 78.7 |
| KRH60001 | Soybean | mitochondrion | 78.51 | 77.16 |
| EES01200 | Sorghum | cytosol | 77.63 | 76.96 |
| KRH41272 | Soybean | nucleus | 78.07 | 76.72 |
| GSMUA_Achr4P00970_001 | Banana | cytosol | 80.26 | 76.57 |
| Zm00001d011504_P003 | Maize | cytosol | 77.19 | 76.52 |
| Zm00001d043991_P001 | Maize | plasma membrane, plastid | 76.75 | 76.09 |
| Solyc09g048990.2.1 | Tomato | unclear | 41.23 | 75.81 |
| KRH60005 | Soybean | cytosol, endoplasmic reticulum, nucleus | 78.07 | 75.74 |
| TraesCS3A01G238700.1 | Wheat | cytosol, golgi, nucleus | 75.0 | 75.33 |
| KRH60006 | Soybean | cytosol, endoplasmic reticulum, nucleus | 78.95 | 75.31 |
| Os01t0659200-01 | Rice | plasma membrane | 75.88 | 75.22 |
| HORVU3Hr1G059320.2 | Barley | vacuole | 74.56 | 74.89 |
| TraesCS3D01G239100.1 | Wheat | cytosol | 74.56 | 74.89 |
| KRH41277 | Soybean | cytosol, endoplasmic reticulum | 78.07 | 74.79 |
| CDY38187 | Canola | cytosol | 77.19 | 74.26 |
| Bra027752.1-P | Field mustard | cytosol | 77.19 | 74.26 |
| AT4G11150.1 | Thale cress | cytosol | 74.12 | 73.48 |
| CDY08365 | Canola | cytosol | 76.75 | 72.92 |
| TraesCS3B01G267400.1 | Wheat | cytosol | 75.88 | 72.69 |
| CDY68201 | Canola | cytosol | 72.37 | 71.74 |
| CDX94228 | Canola | cytosol | 72.37 | 71.74 |
| CDX90773 | Canola | cytosol | 72.37 | 71.74 |
| CDY68698 | Canola | cytosol | 71.93 | 71.3 |
| CDY25274 | Canola | cytosol | 71.93 | 71.3 |
| CDX86813 | Canola | cytosol | 71.93 | 71.3 |
| Bra033155.1-P | Field mustard | cytosol | 71.93 | 71.3 |
| AT1G64200.2 | Thale cress | cytosol | 73.68 | 70.89 |
| Zm00001d039330_P001 | Maize | cytosol, plasma membrane | 69.3 | 68.7 |
| EES00037 | Sorghum | cytosol | 68.86 | 68.26 |
| Bra035248.1-P | Field mustard | cytosol | 64.91 | 68.2 |
| Os01t0222500-01 | Rice | plasma membrane | 68.86 | 67.97 |
| TraesCS7A01G408700.1 | Wheat | cytosol | 65.79 | 65.22 |
| VIT_02s0025g00960.t01 | Wine grape | cytosol | 21.93 | 64.1 |
| TraesCS3B01G173900.2 | Wheat | cytosol | 66.23 | 63.71 |
| TraesCS3D01G155400.2 | Wheat | cytosol | 66.23 | 63.71 |
| TraesCS3A01G146600.2 | Wheat | cytosol | 66.23 | 63.71 |
| Zm00001d017087_P001 | Maize | cytosol | 25.88 | 59.0 |
| HORVU3Hr1G029880.8 | Barley | cytosol | 66.67 | 52.23 |
| Bra000737.1-P | Field mustard | cytosol | 71.49 | 37.82 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0033178 | GO:GO:0046961 | InterPro:IPR038495 | UniProt:K4DFU2 |
| HAMAP:MF_00311 | PFAM:PF01991 | PANTHER:PTHR12317 | PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | EnsemblPlantsGene:Solyc12g056110.1 |
| EnsemblPlants:Solyc12g056110.1.1 | UniParc:UPI0002769D35 | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:62076970..62082953
Molecular Weight (calculated)
26071.5 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.428
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDGDVSKQI HQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRLEYERKEK QVDVRKKIEY SMQLNASRIK VLQAQDDLIS SMEETAAKEI
101: LHVSNHHSYK KLLHDLIVQS LLRLKEPSVL LRCRKDDVNL VEDVLDAVKE EYAEKAMVHT PEIIIDHIHL PPAPSHHNAH GPSCSGGVVL ASRDGKIVCE
201: NTLDARLEVV FRKKLPEIRK CLFSGIAV
101: LHVSNHHSYK KLLHDLIVQS LLRLKEPSVL LRCRKDDVNL VEDVLDAVKE EYAEKAMVHT PEIIIDHIHL PPAPSHHNAH GPSCSGGVVL ASRDGKIVCE
201: NTLDARLEVV FRKKLPEIRK CLFSGIAV
001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA
Arabidopsis Description
VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.