Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027752.1-P | Field mustard | cytosol | 98.33 | 99.58 |
| CDY38187 | Canola | cytosol | 97.92 | 99.16 |
| AT1G64200.2 | Thale cress | cytosol | 87.92 | 89.03 |
| CDX90773 | Canola | cytosol | 78.75 | 82.17 |
| CDY68698 | Canola | cytosol | 78.33 | 81.74 |
| CDX86813 | Canola | cytosol | 77.92 | 81.3 |
| CDY68201 | Canola | cytosol | 77.92 | 81.3 |
| CDY25274 | Canola | cytosol | 77.08 | 80.43 |
| CDX94228 | Canola | cytosol | 76.67 | 80.0 |
| Os01t0659200-01 | Rice | plasma membrane | 75.42 | 78.7 |
| Solyc08g081910.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 75.42 | 78.36 |
| VIT_02s0025g01000.t01 | Wine grape | cytosol | 74.17 | 77.39 |
| Zm00001d043991_P001 | Maize | plasma membrane, plastid | 73.75 | 76.96 |
| EES01200 | Sorghum | cytosol | 73.75 | 76.96 |
| Solyc12g056110.1.1 | Tomato | cytosol | 72.92 | 76.75 |
| KRH60001 | Soybean | mitochondrion | 74.17 | 76.72 |
| GSMUA_Achr4P00970_001 | Banana | cytosol | 76.25 | 76.57 |
| Zm00001d011504_P003 | Maize | cytosol | 73.33 | 76.52 |
| KRH41272 | Soybean | nucleus | 73.75 | 76.29 |
| Solyc08g008210.2.1 | Tomato | extracellular, nucleus | 76.25 | 75.93 |
| PGSC0003DMT400014945 | Potato | cytosol | 75.83 | 75.52 |
| TraesCS3A01G238700.1 | Wheat | cytosol, golgi, nucleus | 71.25 | 75.33 |
| HORVU3Hr1G059320.2 | Barley | vacuole | 71.25 | 75.33 |
| GSMUA_Achr4P08420_001 | Banana | cytosol | 72.08 | 75.22 |
| KRH60005 | Soybean | cytosol, endoplasmic reticulum, nucleus | 73.33 | 74.89 |
| TraesCS3D01G239100.1 | Wheat | cytosol | 70.83 | 74.89 |
| KRH60006 | Soybean | cytosol, endoplasmic reticulum, nucleus | 74.17 | 74.48 |
| KRH41277 | Soybean | cytosol, endoplasmic reticulum | 73.33 | 73.95 |
| GSMUA_Achr4P15600_001 | Banana | cytosol | 70.0 | 73.04 |
| TraesCS3B01G267400.1 | Wheat | cytosol | 71.25 | 71.85 |
| EES00037 | Sorghum | cytosol | 65.42 | 68.26 |
| Zm00001d039330_P001 | Maize | cytosol, plasma membrane | 65.0 | 67.83 |
| CDY09560 | Canola | cytosol | 63.33 | 64.68 |
| CDY02306 | Canola | cytosol | 62.92 | 64.26 |
| TraesCS7A01G408700.1 | Wheat | cytosol | 60.42 | 63.04 |
| Os01t0222500-01 | Rice | plasma membrane | 60.42 | 62.77 |
| TraesCS3A01G146600.2 | Wheat | cytosol | 60.0 | 60.76 |
| TraesCS3D01G155400.2 | Wheat | cytosol | 59.58 | 60.34 |
| TraesCS3B01G173900.2 | Wheat | cytosol | 59.17 | 59.92 |
| VIT_02s0025g00960.t01 | Wine grape | cytosol | 19.17 | 58.97 |
| Zm00001d017087_P001 | Maize | cytosol | 24.17 | 58.0 |
| HORVU3Hr1G029880.8 | Barley | cytosol | 61.67 | 50.86 |
| CDX77585 | Canola | mitochondrion | 23.75 | 32.57 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | GO:A0A078F1M7 | UniProt:A0A078F1M7 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu |
| EnsemblPlants:CDY08365 | ProteinID:CDY08365 | ProteinID:CDY08365.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0033178 | GO:GO:0046961 | EnsemblPlantsGene:GSBRNA2T00000081001 | InterPro:IPR038495 | HAMAP:MF_00311 |
| PFAM:PF01991 | PANTHER:PTHR12317 | PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | UniParc:UPI0004EE4866 | SEG:seg |
Description
BnaC09g12310DBnaC09g12310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F1M7]
Coordinates
chrLK031985:-:582951..584777
Molecular Weight (calculated)
27653.2 Da
IEP (calculated)
6.013
GRAVY (calculated)
-0.541
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDADVSKQI EQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRRKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSEHGFFN HHHHQYKHLL KHLIVQCLLR LKEPSVLLRC RNEDLHIVES MLDDATEEYC EKAKVHAPEI IVDKDIFLPP APSEDDPHAP FCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR KKLPEIRKSL FGQVGAAFDE
101: LKVSEHGFFN HHHHQYKHLL KHLIVQCLLR LKEPSVLLRC RNEDLHIVES MLDDATEEYC EKAKVHAPEI IVDKDIFLPP APSEDDPHAP FCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR KKLPEIRKSL FGQVGAAFDE
001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
Arabidopsis Description
VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.