CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032402.1-P	Field mustard	cytosol	100.0	100.0
CDY09560	Canola	cytosol	99.57	99.57
AT3G08560.1	Thale cress	cytosol, nucleus, peroxisome	95.32	95.32
PGSC0003DMT400010366	Potato	cytosol	68.51	72.2
VIT_08s0056g00620.t01	Wine grape	cytosol	70.21	71.74
Solyc09g048990.2.1	Tomato	unclear	37.02	70.16
CDX86813	Canola	cytosol	68.51	70.0
CDY68201	Canola	cytosol	68.51	70.0
CDX90773	Canola	cytosol	68.09	69.57
CDY68698	Canola	cytosol	67.66	69.13
KRH29400	Soybean	cytosol	69.36	69.07
KRH24417	Soybean	cytosol	66.81	68.86
CDY25274	Canola	cytosol	66.81	68.26
CDX94228	Canola	cytosol	66.38	67.83
Zm00001d038490_P001	Maize	cytosol	65.53	66.67
OQU78193	Sorghum	cytosol	65.11	66.23
Os05t0480700-01	Rice	plasma membrane	65.11	66.23
HORVU1Hr1G069480.1	Barley	cytosol	64.68	65.52
HORVU0Hr1G025810.2	Barley	cytosol	64.68	65.52
TraesCS1B01G312000.1	Wheat	cytosol	63.83	64.94
TraesCS1D01G301600.1	Wheat	cytosol	63.4	64.5
CDY38187	Canola	cytosol	64.26	63.71
CDY08365	Canola	cytosol	64.26	62.92
TraesCS1A01G302200.2	Wheat	cytosol	63.83	55.56
CDX77585	Canola	mitochondrion	35.74	48.0

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	GO:A0A078EM59	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	EnsemblPlants:CDY02306
ProteinID:CDY02306	ProteinID:CDY02306.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787
GO:GO:0033178	GO:GO:0046961	EnsemblPlantsGene:GSBRNA2T00113759001	InterPro:IPR038495	HAMAP:MF_00311	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI0002542550	:	:

Description

BnaA09g25960D

Coordinates

chrLK031933:-:240574..241785

Molecular Weight (calculated)

26798.3 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.654

Length

235 amino acids

Sequence
(BLAST)

001: MNDADVSKQI QQMVRFIRQE ADEKANEISI SAEEEFNIER LQLLETAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT SMKDSAAKDL
101: LRVSNDKNAY KKLLKALIVE SLLRLKEPSV LLRCREMDKK VVESIIEDAK KQYADKAKVA SPKITIDEKV FLPPPPNPKQ PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA

Best Arabidopsis Sequence Match ( AT3G08560.1 )
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIER LQLLESAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT AMKDSAAKDL
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA

Arabidopsis Description

VHA-E2VHA-E2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP35]
SUBAcon: [cytosol,nucleus,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.