Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G301600.1 | Wheat | cytosol | 84.07 | 98.27 |
| TraesCS1B01G312000.1 | Wheat | cytosol | 84.07 | 98.27 |
| HORVU1Hr1G069480.1 | Barley | cytosol | 81.11 | 94.4 |
| HORVU0Hr1G025810.2 | Barley | cytosol | 81.11 | 94.4 |
| Os05t0480700-01 | Rice | plasma membrane | 69.26 | 80.95 |
| Zm00001d038490_P001 | Maize | cytosol | 67.78 | 79.22 |
| OQU78193 | Sorghum | cytosol | 67.04 | 78.36 |
| Solyc09g048990.2.1 | Tomato | unclear | 32.22 | 70.16 |
| VIT_08s0056g00620.t01 | Wine grape | cytosol | 59.63 | 70.0 |
| KRH24417 | Soybean | cytosol | 56.67 | 67.11 |
| PGSC0003DMT400010366 | Potato | cytosol | 55.19 | 66.82 |
| KRH29400 | Soybean | cytosol | 57.04 | 65.25 |
| AT3G08560.1 | Thale cress | cytosol, nucleus, peroxisome | 55.93 | 64.26 |
| CDY09560 | Canola | cytosol | 55.56 | 63.83 |
| CDY02306 | Canola | cytosol | 55.56 | 63.83 |
| Bra032402.1-P | Field mustard | cytosol | 55.56 | 63.83 |
| TraesCS3A01G238700.1 | Wheat | cytosol, golgi, nucleus | 53.33 | 63.44 |
| TraesCS7A01G408700.1 | Wheat | cytosol | 48.89 | 57.39 |
| TraesCS3A01G146600.2 | Wheat | cytosol | 47.78 | 54.43 |
| CDX77585 | Canola | mitochondrion | 19.26 | 29.71 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0033178 | GO:GO:0046961 | InterPro:IPR038495 | HAMAP:MF_00311 | PFAM:PF01991 | PANTHER:PTHR12317 |
| PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | EnsemblPlantsGene:TraesCS1A01G302200 | EnsemblPlants:TraesCS1A01G302200.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:+:496122477..496123688
Molecular Weight (calculated)
30825.4 Da
IEP (calculated)
9.538
GRAVY (calculated)
-0.469
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDVDVGKQI QQMVRFIQQE AQEKASEISV AAEEVCTLSI TVSTDRSSAL ICSFNFKRSR MNQSEYLIPG WLQDFNIEKL QLVESEKRKI RQEYERKQKQ
101: VDIRRKIEYS MELNAARIKV LQAQEDVVGE MKENASKTLV RVTKDTNVYR KILKGLIVQS LLRLRESSVV LRCREADRVH VEPVLEAAKK EYAEKLKVNL
201: PKIIIDGKVH LPPQRANDAA HGPACSGGVV LASQDGKIVC DNTLDTRVDV CFRQKLPEIR KKLYGQQVSQ
101: VDIRRKIEYS MELNAARIKV LQAQEDVVGE MKENASKTLV RVTKDTNVYR KILKGLIVQS LLRLRESSVV LRCREADRVH VEPVLEAAKK EYAEKLKVNL
201: PKIIIDGKVH LPPQRANDAA HGPACSGGVV LASQDGKIVC DNTLDTRVDV CFRQKLPEIR KKLYGQQVSQ
001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
Arabidopsis Description
VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.