Factsheet for Os05t0480700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038490_P001	Maize	cytosol	84.42	84.42
OQU78193	Sorghum	cytosol	83.55	83.55
TraesCS1B01G312000.1	Wheat	cytosol	80.95	80.95
TraesCS1D01G301600.1	Wheat	cytosol	80.09	80.09
HORVU0Hr1G025810.2	Barley	cytosol	80.09	79.74
HORVU1Hr1G069480.1	Barley	cytosol	80.09	79.74
VIT_08s0056g00620.t01	Wine grape	cytosol	71.86	72.17
TraesCS1A01G302200.2	Wheat	cytosol	80.95	69.26
Os01t0659200-01	Rice	plasma membrane	68.4	68.7
Solyc09g048990.2.1	Tomato	unclear	36.8	68.55
KRH24417	Soybean	cytosol	67.1	67.98
PGSC0003DMT400010366	Potato	cytosol	64.94	67.26
KRH29400	Soybean	cytosol	67.97	66.53
CDY09560	Canola	cytosol	66.67	65.53
AT3G08560.1	Thale cress	cytosol, nucleus, peroxisome	66.67	65.53
CDY02306	Canola	cytosol	66.23	65.11
Bra032402.1-P	Field mustard	cytosol	66.23	65.11
Os01t0222500-01	Rice	plasma membrane	59.31	59.31
CDX77585	Canola	mitochondrion	24.68	32.57

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	EntrezGene:4339122	ProteinID:AAW56865.1	EMBL:AK100850	InterPro:ATPase_E_C
InterPro:ATPase_V1_Esu	ProteinID:BAF17771.1	ProteinID:BAS94574.1	ncoils:Coil	ProteinID:EEE64114.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787
GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	HAMAP:MF_00311	EnsemblPlantsGene:Os05g0480700	EnsemblPlants:Os05t0480700-01
PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	UniProt:Q5KQI7	SUPFAM:SSF160527	UniParc:UPI00004BA96C
RefSeq:XP_015640267.1	SEG:seg	:	:	:	:

Description

Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit). (Os05t0480700-01)

Coordinates

chr5:+:23632284..23633975

Molecular Weight (calculated)

26015.6 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.492

Length

231 amino acids

Sequence
(BLAST)

001: MNDADVGKQI QQMVRFILQE AEEKASEISV AAEEEFNIEK LQLVESEKRR IRQDYERKAK QVDVGRKIEY STQLNAARIK VLRAQDGVVG EMKEDAGKSL
101: LRVTKDATAY RKVLKGLIVQ SLLRLREPSV VLRCREADRG HVESVLEAAK KEYAEKAKVN LPKILIDGKV YLPPPKTARD AHGPFCSGGV VIASQDGKIV
201: CDNTLDARVE ISFKQKLPEI RKKLFSQKVS Q

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.