Factsheet for Bra032402.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02306	Canola	cytosol	100.0	100.0
AT3G08560.1	Thale cress	cytosol, nucleus, peroxisome	95.32	95.32
PGSC0003DMT400010366	Potato	cytosol	68.51	72.2
VIT_08s0056g00620.t01	Wine grape	cytosol	70.21	71.74
Solyc09g048990.2.1	Tomato	unclear	37.02	70.16
KRH29400	Soybean	cytosol	69.36	69.07
KRH24417	Soybean	cytosol	66.81	68.86
Bra033155.1-P	Field mustard	cytosol	66.81	68.26
Bra035248.1-P	Field mustard	cytosol	62.13	67.28
Zm00001d038490_P001	Maize	cytosol	65.53	66.67
OQU78193	Sorghum	cytosol	65.11	66.23
Os05t0480700-01	Rice	plasma membrane	65.11	66.23
HORVU1Hr1G069480.1	Barley	cytosol	64.68	65.52
HORVU0Hr1G025810.2	Barley	cytosol	64.68	65.52
TraesCS1B01G312000.1	Wheat	cytosol	63.83	64.94
TraesCS1D01G301600.1	Wheat	cytosol	63.4	64.5
Bra027752.1-P	Field mustard	cytosol	64.26	63.71
TraesCS1A01G302200.2	Wheat	cytosol	63.83	55.56
Bra000737.1-P	Field mustard	cytosol	67.66	36.89

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	EnsemblPlantsGene:Bra032402	EnsemblPlants:Bra032402.1
EnsemblPlants:Bra032402.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150
GO:GO:0015991	GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495
UniProt:M4EUC0	HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527
UniParc:UPI0002542550	:	:	:	:	:

Description

AT3G08560 (E=4e-124) VHA-E2 | VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2); hydrogen-exporting ATPase, phosphorylative mechanism / proton-transporting ATPase, rotational mechanism

Coordinates

chrA09:+:21729833..21730865

Molecular Weight (calculated)

26798.3 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.654

Length

235 amino acids

Sequence
(BLAST)

001: MNDADVSKQI QQMVRFIRQE ADEKANEISI SAEEEFNIER LQLLETAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT SMKDSAAKDL
101: LRVSNDKNAY KKLLKALIVE SLLRLKEPSV LLRCREMDKK VVESIIEDAK KQYADKAKVA SPKITIDEKV FLPPPPNPKQ PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA

Best Arabidopsis Sequence Match ( AT3G08560.1 )
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIER LQLLESAKRK LRQDYDRKLK QVDIRKRIDY STQLNASRIK YLQAQDDVVT AMKDSAAKDL
101: LRVSNDKNNY KKLLKSLIIE SLLRLKEPSV LLRCREMDKK VVESVIEDAK RQYAEKAKVG SPKITIDEKV FLPPPPNPKL PDSHDPHCSG GVVLASQDGK
201: IVCENTLDAR LDVAFRQKLP QIRTRLVGAP ETSRA

Arabidopsis Description

VHA-E2VHA-E2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP35]
SUBAcon: [cytosol,nucleus,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.