Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90773 | Canola | cytosol | 99.13 | 99.13 |
| CDX86813 | Canola | cytosol | 97.83 | 97.83 |
| CDY68201 | Canola | cytosol | 97.39 | 97.39 |
| CDY25274 | Canola | cytosol | 96.09 | 96.09 |
| CDX94228 | Canola | cytosol | 95.65 | 95.65 |
| AT4G11150.1 | Thale cress | cytosol | 93.48 | 93.48 |
| CDY38187 | Canola | cytosol | 81.74 | 79.32 |
| CDY08365 | Canola | cytosol | 81.74 | 78.33 |
| KRH41272 | Soybean | nucleus | 75.65 | 75.0 |
| Solyc08g081910.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 74.78 | 74.46 |
| VIT_02s0025g01000.t01 | Wine grape | cytosol | 74.35 | 74.35 |
| Os01t0659200-01 | Rice | plasma membrane | 74.35 | 74.35 |
| EES01200 | Sorghum | cytosol | 74.35 | 74.35 |
| KRH60001 | Soybean | mitochondrion | 74.78 | 74.14 |
| Zm00001d043991_P001 | Maize | plasma membrane, plastid | 73.91 | 73.91 |
| Zm00001d011504_P003 | Maize | cytosol | 73.48 | 73.48 |
| KRH60005 | Soybean | cytosol, endoplasmic reticulum, nucleus | 74.78 | 73.19 |
| HORVU3Hr1G059320.2 | Barley | vacuole | 71.74 | 72.69 |
| TraesCS3D01G239100.1 | Wheat | cytosol | 71.74 | 72.69 |
| TraesCS3A01G238700.1 | Wheat | cytosol, golgi, nucleus | 71.74 | 72.69 |
| GSMUA_Achr4P15600_001 | Banana | cytosol | 72.61 | 72.61 |
| GSMUA_Achr4P08420_001 | Banana | cytosol | 72.61 | 72.61 |
| GSMUA_Achr4P00970_001 | Banana | cytosol | 74.78 | 71.97 |
| Solyc12g056110.1.1 | Tomato | cytosol | 71.3 | 71.93 |
| KRH41277 | Soybean | cytosol, endoplasmic reticulum | 73.91 | 71.43 |
| KRH60006 | Soybean | cytosol, endoplasmic reticulum, nucleus | 73.91 | 71.13 |
| PGSC0003DMT400014945 | Potato | cytosol | 74.35 | 70.95 |
| Solyc08g008210.2.1 | Tomato | extracellular, nucleus | 74.35 | 70.95 |
| TraesCS3B01G267400.1 | Wheat | cytosol | 71.3 | 68.91 |
| CDY09560 | Canola | cytosol | 69.57 | 68.09 |
| CDY02306 | Canola | cytosol | 69.13 | 67.66 |
| EES00037 | Sorghum | cytosol | 67.39 | 67.39 |
| Zm00001d039330_P001 | Maize | cytosol, plasma membrane | 65.65 | 65.65 |
| TraesCS7A01G408700.1 | Wheat | cytosol | 63.04 | 63.04 |
| Os01t0222500-01 | Rice | plasma membrane | 61.3 | 61.04 |
| TraesCS3A01G146600.2 | Wheat | cytosol | 62.61 | 60.76 |
| Zm00001d017087_P001 | Maize | cytosol | 26.09 | 60.0 |
| TraesCS3D01G155400.2 | Wheat | cytosol | 61.74 | 59.92 |
| TraesCS3B01G173900.2 | Wheat | cytosol | 61.3 | 59.49 |
| VIT_02s0025g00960.t01 | Wine grape | cytosol | 19.13 | 56.41 |
| Bra000737.1-P | Field mustard | cytosol | 95.22 | 50.81 |
| HORVU3Hr1G029880.8 | Barley | cytosol | 62.17 | 49.14 |
| CDX77585 | Canola | mitochondrion | 26.52 | 34.86 |
Protein Annotations
| MapMan:24.1.1.2.5 | Gene3D:3.30.2320.30 | GO:A0A078JMF5 | UniProt:A0A078JMF5 | InterPro:ATPase_E_C | InterPro:ATPase_V1_Esu |
| EnsemblPlants:CDY68698 | ProteinID:CDY68698 | ProteinID:CDY68698.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015991 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0033178 | GO:GO:0046961 | EnsemblPlantsGene:GSBRNA2T00077080001 | InterPro:IPR038495 | HAMAP:MF_00311 |
| PFAM:PF01991 | PANTHER:PTHR12317 | PANTHER:PTHR12317:SF54 | SUPFAM:SSF160527 | UniParc:UPI0004EB325B | : |
Description
BnaC03g72900DBnaC03g72900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMF5]
Coordinates
chrLK037820:-:2057..3507
Molecular Weight (calculated)
25810.0 Da
IEP (calculated)
4.963
GRAVY (calculated)
-0.384
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDVDVSSQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSGDEDAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG FVESILDGAK EEYAGKANVH APEVAVDTTI FLPPPPTSSD PHALHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RRSLFGQVAA
101: LNVSGDEDAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG FVESILDGAK EEYAGKANVH APEVAVDTTI FLPPPPTSSD PHALHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RRSLFGQVAA
001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA
Arabidopsis Description
VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.