CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25274	Canola	cytosol	97.83	97.83
CDX90773	Canola	cytosol	96.52	96.52
CDY68201	Canola	cytosol	96.52	96.52
CDX86813	Canola	cytosol	95.65	95.65
CDY68698	Canola	cytosol	95.65	95.65
AT4G11150.1	Thale cress	cytosol	94.78	94.78
CDY38187	Canola	cytosol	80.0	77.64
CDY08365	Canola	cytosol	80.0	76.67
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	74.78	74.46
KRH41272	Soybean	nucleus	74.78	74.14
VIT_02s0025g01000.t01	Wine grape	cytosol	73.91	73.91
KRH60001	Soybean	mitochondrion	73.91	73.28
EES01200	Sorghum	cytosol	73.04	73.04
Os01t0659200-01	Rice	plasma membrane	72.61	72.61
Zm00001d043991_P001	Maize	plasma membrane, plastid	72.61	72.61
Solyc12g056110.1.1	Tomato	cytosol	71.74	72.37
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	73.91	72.34
Zm00001d011504_P003	Maize	cytosol	72.17	72.17
HORVU3Hr1G059320.2	Barley	vacuole	70.87	71.81
GSMUA_Achr4P15600_001	Banana	cytosol	71.74	71.74
GSMUA_Achr4P08420_001	Banana	cytosol	71.74	71.74
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	70.43	71.37
TraesCS3D01G239100.1	Wheat	cytosol	70.43	71.37
GSMUA_Achr4P00970_001	Banana	cytosol	73.91	71.13
KRH41277	Soybean	cytosol, endoplasmic reticulum	73.04	70.59
PGSC0003DMT400014945	Potato	cytosol	73.91	70.54
Solyc08g008210.2.1	Tomato	extracellular, nucleus	73.91	70.54
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	73.04	70.29
TraesCS3B01G267400.1	Wheat	cytosol	70.0	67.65
CDY09560	Canola	cytosol	68.26	66.81
EES00037	Sorghum	cytosol	66.52	66.52
CDY02306	Canola	cytosol	67.83	66.38
Zm00001d039330_P001	Maize	cytosol, plasma membrane	65.22	65.22
TraesCS7A01G408700.1	Wheat	cytosol	63.04	63.04
Os01t0222500-01	Rice	plasma membrane	62.61	62.34
Zm00001d017087_P001	Maize	cytosol	26.09	60.0
TraesCS3D01G155400.2	Wheat	cytosol	61.74	59.92
TraesCS3A01G146600.2	Wheat	cytosol	61.74	59.92
TraesCS3B01G173900.2	Wheat	cytosol	61.3	59.49
VIT_02s0025g00960.t01	Wine grape	cytosol	19.57	57.69
HORVU3Hr1G029880.8	Barley	cytosol	62.17	49.14
CDX77585	Canola	mitochondrion	26.96	35.43

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	GO:A0A078E461	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	EnsemblPlants:CDX94228
ProteinID:CDX94228	ProteinID:CDX94228.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787
GO:GO:0033178	GO:GO:0046961	EnsemblPlantsGene:GSBRNA2T00157182001	InterPro:IPR038495	HAMAP:MF_00311	PFAM:PF01991
PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI0004EDE69B	:	:

Description

BnaC02g28880D

Coordinates

chrLK031880:-:25703..27231

Molecular Weight (calculated)

25957.1 Da

IEP (calculated)

4.862

GRAVY (calculated)

-0.428

Length

230 amino acids

Sequence
(BLAST)

001: MNDGEVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKNEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSGDEYAY KQLLNDLIVQ CLLRLKEPSV LLRCREEDLG LVEYILDDAK EEYAGKANVH APEVAVDTTI FLPPPPTSSD PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RRSLFGQVAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.