Factsheet for VIT_02s0025g00960.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01000.t01	Wine grape	cytosol	79.49	26.96
KRH60001	Soybean	mitochondrion	71.79	24.14
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	71.79	23.83
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	71.79	23.43
KRH41272	Soybean	nucleus	69.23	23.28
KRH41277	Soybean	cytosol, endoplasmic reticulum	69.23	22.69
EES01200	Sorghum	cytosol	66.67	22.61
Zm00001d043991_P001	Maize	plasma membrane, plastid	65.38	22.17
Zm00001d011504_P003	Maize	cytosol	65.38	22.17
Os01t0659200-01	Rice	plasma membrane	65.38	22.17
Solyc12g056110.1.1	Tomato	cytosol	64.1	21.93
TraesCS3A01G238700.1	Wheat	cytosol, golgi, nucleus	62.82	21.59
HORVU3Hr1G059320.2	Barley	vacuole	62.82	21.59
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	62.82	21.21
TraesCS3D01G239100.1	Wheat	cytosol	61.54	21.15
TraesCS3B01G267400.1	Wheat	cytosol	62.82	20.59
Solyc08g008210.2.1	Tomato	extracellular, nucleus	62.82	20.33
PGSC0003DMT400014945	Potato	cytosol	62.82	20.33
CDY38187	Canola	cytosol	60.26	19.83
Bra027752.1-P	Field mustard	cytosol	60.26	19.83
CDX90773	Canola	cytosol	57.69	19.57
CDX94228	Canola	cytosol	57.69	19.57
CDY08365	Canola	cytosol	58.97	19.17
Bra033155.1-P	Field mustard	cytosol	56.41	19.13
CDY68698	Canola	cytosol	56.41	19.13
CDY68201	Canola	cytosol	56.41	19.13
CDY25274	Canola	cytosol	56.41	19.13
AT1G64200.2	Thale cress	cytosol	57.69	18.99
CDX86813	Canola	cytosol	55.13	18.7
VIT_08s0056g00620.t01	Wine grape	cytosol	55.13	18.7
AT4G11150.1	Thale cress	cytosol	55.13	18.7
Bra035248.1-P	Field mustard	cytosol	41.03	14.75
Bra000737.1-P	Field mustard	cytosol	57.69	10.44

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ProteinID:CBI34437	ProteinID:CBI34437.3
UniProt:D7TVB2	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787	GO:GO:0033178
GO:GO:0046961	InterPro:IPR038495	PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF21	SUPFAM:SSF160527
UniParc:UPI00015CCDD7	ArrayExpress:VIT_02s0025g00960	EnsemblPlantsGene:VIT_02s0025g00960	EnsemblPlants:VIT_02s0025g00960.t01	unigene:Vvi.25545	:

Description

No Description!

Coordinates

chr2:-:914979..916177

Molecular Weight (calculated)

9094.2 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.004

Length

78 amino acids

Sequence
(BLAST)

1: MVQNLLRLKE PAVLLRCRKD DLHLVEFILD SAKNEYAEKA NVYPPEIIVD HQVYLLPAPS HHSCPWSLLV ILFKEKFP

Best Arabidopsis Sequence Match ( AT1G64200.3 )
(BLAST)

001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SW

Arabidopsis Description

VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.