Factsheet for VIT_02s0025g01000.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	86.52	86.15
GSMUA_Achr4P08420_001	Banana	cytosol	85.65	85.65
KRH60001	Soybean	mitochondrion	84.78	84.05
Solyc12g056110.1.1	Tomato	cytosol	83.04	83.77
KRH41272	Soybean	nucleus	84.35	83.62
Solyc08g008210.2.1	Tomato	extracellular, nucleus	86.09	82.16
PGSC0003DMT400014945	Potato	cytosol	86.09	82.16
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	83.91	82.13
GSMUA_Achr4P00970_001	Banana	cytosol	85.22	82.01
GSMUA_Achr4P15600_001	Banana	cytosol	81.74	81.74
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	83.91	80.75
KRH41277	Soybean	cytosol, endoplasmic reticulum	83.04	80.25
VIT_02s0025g00960.t01	Wine grape	cytosol	26.96	79.49
VIT_08s0056g00620.t01	Wine grape	cytosol	75.65	75.65
Bra027752.1-P	Field mustard	cytosol	77.83	75.53
CDY38187	Canola	cytosol	77.83	75.53
CDX90773	Canola	cytosol	74.78	74.78
CDY68201	Canola	cytosol	74.78	74.78
CDY68698	Canola	cytosol	74.35	74.35
CDX86813	Canola	cytosol	74.35	74.35
AT4G11150.1	Thale cress	cytosol	74.35	74.35
CDY08365	Canola	cytosol	77.39	74.17
CDY25274	Canola	cytosol	73.91	73.91
CDX94228	Canola	cytosol	73.91	73.91
Bra033155.1-P	Field mustard	cytosol	73.91	73.91
Zm00001d039330_P001	Maize	cytosol, plasma membrane	72.61	72.61
AT1G64200.2	Thale cress	cytosol	74.78	72.57
Os01t0222500-01	Rice	plasma membrane	72.61	72.29
EES00037	Sorghum	cytosol	72.17	72.17
Bra035248.1-P	Field mustard	cytosol	66.96	70.97
TraesCS7A01G408700.1	Wheat	cytosol	69.13	69.13
TraesCS3A01G146600.2	Wheat	cytosol	70.0	67.93
TraesCS3B01G173900.2	Wheat	cytosol	69.57	67.51
TraesCS3D01G155400.2	Wheat	cytosol	69.57	67.51
Zm00001d017087_P001	Maize	cytosol	27.83	64.0
HORVU3Hr1G029880.8	Barley	cytosol	70.0	55.33
Bra000737.1-P	Field mustard	cytosol	73.91	39.44

Protein Annotations

EntrezGene:100246834	wikigene:100246834	MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu
ProteinID:CBI34442	ProteinID:CBI34442.3	ncoils:Coil	UniProt:D7TVB7	EMBL:FN596251	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	InterPro:IPR038495	EntrezGene:LOC100246834
wikigene:LOC100246834	HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317	PANTHER:PTHR12317:SF54	SUPFAM:SSF160527
TIGR:TC52973	TIGR:TC62145	UniParc:UPI00015CCCD5	ArrayExpress:VIT_02s0025g01000	EnsemblPlantsGene:VIT_02s0025g01000	EnsemblPlants:VIT_02s0025g01000.t01
unigene:Vvi.1577	RefSeq:XP_002274995	RefSeq:XP_002274995.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:970227..974052

Molecular Weight (calculated)

26450.9 Da

IEP (calculated)

7.715

GRAVY (calculated)

-0.489

Length

230 amino acids

Sequence
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQEYERKEK QVDIRKKIEY SMQLNASRIK VLQAQDDLVS SMKEAASKEL
101: LHVSHDHHVY KRLLRDLVVQ SLLRLKEPAV LLRCRKDDLH LVESILDSAK DEYAGKANVY PPEIIVDHQV YLPPAPSHHH AHGPFCSGGV VLASRDGKIV
201: CENTLDARLD VVFRKKLPEI RKWLFGQVAA

Best Arabidopsis Sequence Match ( AT4G11150.1 )
(BLAST)

001: MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL
101: LNVSRDEYAY KQLLKDLIVQ CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND PHGLHCSGGV VLASRDGKIV
201: CENTLDARLD VAFRMKLPVI RKSLFGQVTA

Arabidopsis Description

VHA-E1V-type proton ATPase subunit E1 [Source:UniProtKB/Swiss-Prot;Acc:Q39258]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.