Factsheet for GSMUA_Achr4P00970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01000.t01	Wine grape	cytosol	82.01	85.22
GSMUA_Achr4P08420_001	Banana	cytosol	80.33	83.48
Solyc08g081910.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	78.66	81.39
GSMUA_Achr4P15600_001	Banana	cytosol	78.24	81.3
KRH41272	Soybean	nucleus	78.24	80.6
KRH60001	Soybean	mitochondrion	78.24	80.6
Solyc12g056110.1.1	Tomato	cytosol	76.57	80.26
KRH41277	Soybean	cytosol, endoplasmic reticulum	79.92	80.25
KRH60005	Soybean	cytosol, endoplasmic reticulum, nucleus	77.82	79.15
KRH60006	Soybean	cytosol, endoplasmic reticulum, nucleus	79.08	79.08
PGSC0003DMT400014945	Potato	cytosol	79.5	78.84
Solyc08g008210.2.1	Tomato	extracellular, nucleus	79.5	78.84
CDY38187	Canola	cytosol	76.99	77.64
Bra027752.1-P	Field mustard	cytosol	76.99	77.64
CDY08365	Canola	cytosol	76.57	76.25
CDY68201	Canola	cytosol	73.22	76.09
AT4G11150.1	Thale cress	cytosol	72.8	75.65
CDX90773	Canola	cytosol	72.38	75.22
CDX86813	Canola	cytosol	72.38	75.22
CDY68698	Canola	cytosol	71.97	74.78
CDY25274	Canola	cytosol	71.55	74.35
Bra033155.1-P	Field mustard	cytosol	71.55	74.35
CDX94228	Canola	cytosol	71.13	73.91
AT1G64200.2	Thale cress	cytosol	73.22	73.84
Bra035248.1-P	Field mustard	cytosol	65.69	72.35
Zm00001d039330_P001	Maize	cytosol, plasma membrane	68.62	71.3
EES00037	Sorghum	cytosol	68.62	71.3
Os01t0222500-01	Rice	plasma membrane	67.36	69.7
TraesCS7A01G408700.1	Wheat	cytosol	64.85	67.39
TraesCS3B01G173900.2	Wheat	cytosol	64.85	65.4
TraesCS3A01G146600.2	Wheat	cytosol	64.44	64.98
TraesCS3D01G155400.2	Wheat	cytosol	64.02	64.56
Zm00001d017087_P001	Maize	cytosol	26.36	63.0
HORVU3Hr1G029880.8	Barley	cytosol	65.27	53.61
Bra000737.1-P	Field mustard	cytosol	69.87	38.75

Protein Annotations

MapMan:24.1.1.2.5	Gene3D:3.30.2320.30	InterPro:ATPase_E_C	InterPro:ATPase_V1_Esu	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015991
GO:GO:0016020	GO:GO:0016787	GO:GO:0033178	GO:GO:0046961	EnsemblPlantsGene:GSMUA_Achr4G00970_001	EnsemblPlants:GSMUA_Achr4P00970_001
EnsemblPlants:GSMUA_Achr4T00970_001	InterPro:IPR038495	UniProt:M0SK14	HAMAP:MF_00311	PFAM:PF01991	PANTHER:PTHR12317
PANTHER:PTHR12317:SF54	SUPFAM:SSF160527	UniParc:UPI00029678A7	SEG:seg	:	:

Description

V-type proton ATPase subunit E [Source:GMGC_GENE;Acc:GSMUA_Achr4G00970_001]

Coordinates

chr4:+:812080..817169

Molecular Weight (calculated)

27345.9 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.524

Length

239 amino acids

Sequence
(BLAST)

001: MNDADVSKQI QQMVRFIRQE AEEKANEISI SAEEEFNIEK LQLVEAEMKK IRQEYERKEK QVEIRKKIEY SMQLNASRIK VLQAQDDLVN SMKEDAAKEL
101: LNVSHHHHIL NVTHHDHEYK HLLKELIVQS LLRLKEPAVL LRCRKDDAHL VESALESAKE DYAAKANVHP PDIIIDHKVY LPPAPSHHHA HGPSCSGGVV
201: LASIDGKIVC ENTLDARLDV AFRKKLPEIR KSLYGQVVA

Best Arabidopsis Sequence Match ( AT1G64200.1 )
(BLAST)

001: MNDADASIQI QQMVRFIRQE AEEKANEISI SSEEEFNIEK LQLVEAEKKK IRQEYEKKEK QVDVRKKIDY SMQLNASRIK VLQAQDDIVN AMKEEAAKQL
101: LKVSQHGFFN HHHHQYKHLL KDLIVQCLLR LKEPAVLLRC REEDLDIVES MLDDASEEYC KKAKVHAPEI IVDKDIFLPP APSDDDPHAL SCAGGVVLAS
201: RDGKIVCENT LDARLEVAFR NKLPEIRKSL FGKVGAA

Arabidopsis Description

VHA-E3vacuolar H+-ATPase subunit E isoform 3 [Source:TAIR;Acc:AT1G64200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.