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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90021
EER90164
EER94470
EER99396
EES00037
EES00348
EES01200
EES01631
EES04615
EES09201
EES16135
EES16322
EES20054
KXG20226
KXG22879
KXG32770
KXG33232
KXG37587
KXG37588
OQU78227
OQU79501

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35410.1 EES20054 AT1G12840.1 17875927
AT5G35410.1 KXG22879 AT1G12840.1 17875927
AT5G35410.1 KXG20226 AT1G20260.1 17875927
AT5G35410.1 EER99396 AT1G30860.1 21798944
AT5G35410.1 KXG20226 AT1G76030.1 17875927
AT5G35410.1 EER90164 AT1G78900.1 17875927
AT5G35410.1 EES04615 AT1G78900.1 17875927
AT5G35410.1 EES00348 AT2G01190.1 21798944
AT5G35410.1 EES01631 AT2G41090.1 17360592
AT5G35410.1 EES09201 AT2G41090.1 17360592
AT5G35410.1 EES16322 AT2G41090.1 17360592
AT5G35410.1 OQU78227 AT2G41090.1 17360592
AT5G35410.1 EES01631 AT2G41100.1 17360592
AT5G35410.1 EES09201 AT2G41100.1 17360592
AT5G35410.1 EES16322 AT2G41100.1 17360592
AT5G35410.1 OQU78227 AT2G41100.1 17360592
AT5G35410.1 EES00037 AT4G11150.1 17875927
AT5G35410.1 EES01200 AT4G11150.1 17875927
AT5G35410.1 KXG37587 AT4G14640.1 17360592
AT5G35410.1 KXG37588 AT4G14640.1 17360592
AT5G35410.1 KXG32770 AT4G33000.1 17449811
AT5G35410.1 KXG33232 AT4G33000.1 17449811
AT5G35410.1 KXG32770 AT4G33000.1 17825054
AT5G35410.1 KXG33232 AT4G33000.1 17825054
AT5G35410.1 KXG32770 AT4G33000.1 19448033
AT5G35410.1 KXG33232 AT4G33000.1 19448033
AT5G35410.1 EES01631 AT5G21274.1 17360592
AT5G35410.1 EES09201 AT5G21274.1 17360592
AT5G35410.1 EES16322 AT5G21274.1 17360592
AT5G35410.1 OQU78227 AT5G21274.1 17360592
AT5G35410.1 EER90021 AT5G35410.1 11402167
AT5G35410.1 EER94470 AT5G47100.1 14730064
AT5G35410.1 OQU79501 AT5G55990.1 11402167
AT5G35410.1 EES16135 AT5G63310.1 17785451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036879_P001 Maize cytosol, mitochondrion 94.88 94.88
Zm00001d000407_P001 Maize plastid 92.87 92.26
Os06t0606000-01 Rice cytosol 90.2 89.4
TraesCS7B01G279300.1 Wheat mitochondrion 86.64 87.22
TraesCS7A01G377600.1 Wheat mitochondrion 86.64 87.22
TraesCS7D01G374400.2 Wheat mitochondrion 86.19 86.77
HORVU7Hr1G090260.14 Barley cytosol 89.75 79.8
VIT_11s0016g05420.t01 Wine grape cytosol 72.16 72.65
KRH03685 Soybean cytosol 70.82 71.3
PGSC0003DMT400007475 Potato cytosol 70.6 71.08
Solyc12g009570.1.1 Tomato cytosol 69.49 69.96
KRH20252 Soybean cytosol 69.27 69.73
GSMUA_Achr10P... Banana cytosol 73.72 69.54
AT5G35410.1 Thale cress cytosol 69.04 69.51
CDY44603 Canola cytosol 68.15 67.55
Bra025613.1-P Field mustard cytosol 67.71 67.11
CDY36813 Canola cytosol 67.71 67.11
KXG32670 Sorghum cytosol 62.58 61.89
OQU82814 Sorghum cytosol 56.57 57.73
EER92947 Sorghum cytosol, plastid 56.35 56.6
OQU88438 Sorghum cytosol, mitochondrion 53.9 56.15
EES16537 Sorghum cytosol 49.67 55.34
EER92350 Sorghum cytosol, mitochondrion 54.79 54.79
KXG37001 Sorghum cytosol, mitochondrion 52.34 52.46
EER97615 Sorghum cytosol 44.99 45.5
EES00612 Sorghum cytosol 46.55 45.14
OQU77359 Sorghum cytosol, mitochondrion 44.77 43.6
EES19859 Sorghum cytosol 32.96 29.37
EES01406 Sorghum cytosol 32.52 29.26
KXG39612 Sorghum cytosol 32.29 28.27
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3MapMan:26.6.1.1.2Gene3D:3.30.200.20Gene3D:3.30.310.80EntrezGene:8082266UniProt:C4P7U7
EnsemblPlants:EER90021ProteinID:EER90021ProteinID:EER90021.1EMBL:FJ901226GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005773GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009628GO:GO:0009651GO:GO:0009705GO:GO:0009987GO:GO:0016020GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451
InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343PANTHER:PTHR24343:SF157
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3010G186300SUPFAM:SSF56112unigene:Sbi.10415
unigene:Sbi.21620InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A42033RefSeq:XP_002438654.1::
Description
hypothetical protein
Coordinates
chr10:-:52686383..52693369
Molecular Weight (calculated)
50417.9 Da
IEP (calculated)
8.852
GRAVY (calculated)
-0.188
Length
449 amino acids
Sequence
(BLAST)
001: MAGAAGRKKR VGRYEVGRTI GQGTFAKVKF AVDADTGAAV AMKVLDKETI FTHRMLHQIK REISIMKIVR HPNIVRLNEV LAGKTKIYII LELVTGGELF
101: DKIARHGKLR ENEARKYFQQ LIDAIDYCHS KGVYHRDLKP ENLLLDSRGN LKVSDFGLST LSQNGVGLLH TTCGTPNYVA PEVLGSNGYA GSAADIWSCG
201: VILYVLMAGY LPFEENDLPS LYEKITAAQY SCPYWFSPGA KSLIQRILDP NPRTRITIEE IRADPWFGKN YVAIRRGEDE NVSLDDVQAV FDNIEDKYVS
301: EEVTHKDGGP LMMNAFEMIT LSQGLDLSAL FDRQQEFVKR QTRFVSRKPA KTIVATIEVV AESMGLKVHS QNYKLRLEGA ASNRMSQFAV VLEVFEVAPS
401: LFMVDVRKVA GDTLEYHRFY KNLCSKLDSI IWRPTEVSAK STLLRTTTC
Best Arabidopsis Sequence Match ( AT5G35410.1 )
(BLAST)
001: MTKKMRRVGK YEVGRTIGEG TFAKVKFARN TDTGDNVAIK IMAKSTILKN RMVDQIKREI SIMKIVRHPN IVRLYEVLAS PSKIYIVLEF VTGGELFDRI
101: VHKGRLEESE SRKYFQQLVD AVAHCHCKGV YHRDLKPENL LLDTNGNLKV SDFGLSALPQ EGVELLRTTC GTPNYVAPEV LSGQGYDGSA ADIWSCGVIL
201: FVILAGYLPF SETDLPGLYR KINAAEFSCP PWFSAEVKFL IHRILDPNPK TRIQIQGIKK DPWFRLNYVP IRAREEEEVN LDDIRAVFDG IEGSYVAENV
301: ERNDEGPLMM NAFEMITLSQ GLNLSALFDR RQDFVKRQTR FVSRREPSEI IANIEAVANS MGFKSHTRNF KTRLEGLSSI KAGQLAVVIE IYEVAPSLFM
401: VDVRKAAGET LEYHKFYKKL CSKLENIIWR ATEGIPKSEI LRTITF
Arabidopsis Description
CIPK24Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UB05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.