Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01190.1 | EES06648 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | KXG33416 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | EES07800 | AT5G08330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008591_P001 | Maize | mitochondrion | 93.82 | 93.53 |
| Zm00001d039916_P010 | Maize | nucleus | 92.76 | 93.32 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 19.46 | 90.21 |
| Zm00001d003965_P001 | Maize | mitochondrion | 14.78 | 89.09 |
| Os01t0139200-01 | Rice | nucleus | 81.45 | 80.48 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 76.47 | 72.02 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 71.34 | 71.34 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 70.29 | 70.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.35 | 62.44 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 76.92 | 60.28 |
| GSMUA_Achr10P... | Banana | nucleus | 29.11 | 57.1 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 41.48 | 53.09 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 42.53 | 51.27 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 51.73 | 49.0 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 44.04 | 48.67 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 48.72 | 45.95 |
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.63 | 37.31 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 14.48 | 37.07 |
| CDY24410 | Canola | cytosol | 14.03 | 36.05 |
| VIT_01s0011g04140.t01 | Wine grape | nucleus | 37.41 | 35.58 |
| VIT_17s0000g03180.t01 | Wine grape | nucleus | 34.09 | 35.42 |
| KRH35888 | Soybean | nucleus | 36.65 | 34.37 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 14.03 | 34.19 |
| Solyc05g008830.2.1 | Tomato | nucleus | 33.03 | 34.06 |
| KRG90906 | Soybean | nucleus, plastid | 36.5 | 33.56 |
| CDY25942 | Canola | nucleus, plastid | 31.22 | 32.96 |
| Bra017462.1-P | Field mustard | cytosol, plastid | 31.82 | 32.87 |
| CDY41073 | Canola | nucleus, plastid | 31.22 | 32.81 |
| KRH48572 | Soybean | cytosol | 31.67 | 32.76 |
| PGSC0003DMT400015310 | Potato | nucleus | 32.43 | 32.63 |
| Solyc03g118870.2.1 | Tomato | nucleus | 31.07 | 32.34 |
| KRH39133 | Soybean | cytosol | 32.58 | 32.29 |
| KRH38173 | Soybean | nucleus | 31.37 | 31.9 |
| Solyc04g007460.2.1 | Tomato | plastid | 32.73 | 31.82 |
| Bra024899.1-P | Field mustard | nucleus, plastid | 34.39 | 31.41 |
| PGSC0003DMT400014442 | Potato | nucleus | 32.43 | 31.39 |
| CDY68695 | Canola | nucleus | 25.94 | 31.27 |
| AT2G01190.1 | Thale cress | nucleus, plastid | 33.94 | 31.25 |
| EER99518 | Sorghum | plastid | 18.4 | 31.12 |
| CDY17690 | Canola | nucleus, plastid | 33.48 | 30.66 |
| VIT_14s0006g02490.t01 | Wine grape | nucleus | 23.98 | 30.64 |
| Solyc02g086360.2.1 | Tomato | cytosol | 25.04 | 29.8 |
| PGSC0003DMT400067817 | Potato | cytosol | 24.89 | 29.62 |
| CDY40994 | Canola | cytosol | 25.34 | 29.47 |
| CDY24442 | Canola | cytosol | 25.34 | 29.42 |
| Bra022297.1-P | Field mustard | nucleus | 25.34 | 29.32 |
| CDX92217 | Canola | cytosol | 25.79 | 29.18 |
| Bra022296.1-P | Field mustard | cytosol | 25.94 | 29.05 |
| Bra037596.1-P | Field mustard | nucleus | 27.9 | 28.77 |
| CDY66514 | Canola | nucleus | 27.9 | 28.73 |
| Bra006344.1-P | Field mustard | plastid | 15.23 | 28.45 |
| AT3G18230.1 | Thale cress | nucleus, plastid | 28.51 | 28.38 |
| AT5G16220.1 | Thale cress | plastid | 19.76 | 27.52 |
| CDX70680 | Canola | plastid | 18.55 | 26.68 |
| CDX69461 | Canola | plastid | 19.31 | 26.39 |
| Bra008633.1-P | Field mustard | plastid | 19.31 | 26.39 |
| CDX78676 | Canola | plastid | 17.8 | 26.28 |
| EES09698 | Sorghum | cytosol | 8.75 | 24.58 |
| OQU91169 | Sorghum | cytosol | 8.9 | 24.28 |
| KXG37809 | Sorghum | cytosol | 7.99 | 22.94 |
| KXG37356 | Sorghum | nucleus | 11.16 | 21.33 |
| OQU78054 | Sorghum | cytosol | 11.01 | 19.95 |
| EES07730 | Sorghum | cytosol | 15.69 | 18.37 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.2 | EntrezGene:8060830 | UniProt:C5XQP4 | EnsemblPlants:EES00348 | ProteinID:EES00348 |
| ProteinID:EES00348.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF00564 | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 | SMART:SM00666 | EnsemblPlantsGene:SORBI_3003G078800 | SUPFAM:SSF54277 |
| unigene:Sbi.6403 | UniParc:UPI0001A84783 | RefSeq:XP_002455228.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:6774882..6777648
Molecular Weight (calculated)
69969.5 Da
IEP (calculated)
6.075
GRAVY (calculated)
-0.555
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPLPSATAA GVGGPGPGPG YPESTESSPR SRGGDSWDEP FPSSAAAAAA AAGGGGGRLR LMCSFGGRIV PRPTDKSLCY LGGETRIVAV DRHASLADVH
101: ARLSRSLLGG RPFTLKYQLP NEDLDSLISV STDEDLDNLV DEYDRIAATS SGGGSSRTSR IRLFLFPAKP ESSSSLGSLL DDSSKSENWF VDALNSAISG
201: SLDGIPRGIS TDSASVNCLL GLEDDSSVHS RSGVTNSAPT EDQRASQPKL PVGATAAVAA AAGAGRHLHD VQSVPDSPML DKNSSFGSTS SAPSLSNLPP
301: IRVRPEDRPS DARIMQPAAV EDHFAQMGIS EQQLPPYIQP QQQVPIPAMA GMSPSEASSR VFSDDDKSDH GGGGRKPQPM KQEVPPAVDP SNRAVYYNDR
401: SPPADLKRDM PVGTEAASYR LPGSAPDAAA AAAATQVPPG YVLTQMHVPQ PPQQHPPPQQ QQQPQQPAPQ QIVSAGNQHF IHNPATGTFI PIQSYYHHPV
501: PQQAPQTVPR PQQAPTFDPN TGMYYLPMQQ NAHQPYSMPP GAQVTLPPPT LVDTTPKPTV PIPQMAVRPE LQQPGVYRTT AAATPAPAPN AAPGYAGMAY
601: HHVIQSHHHP SPQPVANMGG NFGYEYADPT RPQVYYSQAA APPTLPPQYQ PMVSPDAGQA EKH
101: ARLSRSLLGG RPFTLKYQLP NEDLDSLISV STDEDLDNLV DEYDRIAATS SGGGSSRTSR IRLFLFPAKP ESSSSLGSLL DDSSKSENWF VDALNSAISG
201: SLDGIPRGIS TDSASVNCLL GLEDDSSVHS RSGVTNSAPT EDQRASQPKL PVGATAAVAA AAGAGRHLHD VQSVPDSPML DKNSSFGSTS SAPSLSNLPP
301: IRVRPEDRPS DARIMQPAAV EDHFAQMGIS EQQLPPYIQP QQQVPIPAMA GMSPSEASSR VFSDDDKSDH GGGGRKPQPM KQEVPPAVDP SNRAVYYNDR
401: SPPADLKRDM PVGTEAASYR LPGSAPDAAA AAAATQVPPG YVLTQMHVPQ PPQQHPPPQQ QQQPQQPAPQ QIVSAGNQHF IHNPATGTFI PIQSYYHHPV
501: PQQAPQTVPR PQQAPTFDPN TGMYYLPMQQ NAHQPYSMPP GAQVTLPPPT LVDTTPKPTV PIPQMAVRPE LQQPGVYRTT AAATPAPAPN AAPGYAGMAY
601: HHVIQSHHHP SPQPVANMGG NFGYEYADPT RPQVYYSQAA APPTLPPQYQ PMVSPDAGQA EKH
001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.