Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033571_P001 | Maize | cytosol | 52.38 | 74.69 |
| OQU91169 | Sorghum | cytosol | 54.98 | 52.26 |
| TraesCS4D01G029100.1 | Wheat | plastid | 45.02 | 42.28 |
| TraesCS4A01G281600.1 | Wheat | plastid | 44.59 | 41.53 |
| TraesCS4B01G031400.1 | Wheat | plastid | 43.29 | 39.53 |
| EES09698 | Sorghum | cytosol | 19.91 | 19.49 |
| OQU78054 | Sorghum | cytosol | 24.68 | 15.57 |
| EER99518 | Sorghum | plastid | 20.35 | 11.99 |
| HORVU4Hr1G026270.1 | Barley | cytosol | 16.45 | 11.52 |
| KXG37356 | Sorghum | nucleus | 16.02 | 10.66 |
| EES07730 | Sorghum | cytosol | 22.51 | 9.19 |
| EES00348 | Sorghum | nucleus | 22.94 | 7.99 |
| Os02t0809100-00 | Rice | cytosol, nucleus, plastid | 12.55 | 5.46 |
| HORVU3Hr1G064760.1 | Barley | cytosol | 2.6 | 3.09 |
Protein Annotations
| EnsemblPlants:KXG37809 | EnsemblPlantsGene:SORBI_3001G130800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000270 |
| InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF1 | PFAM:PF00564 | ProteinID:KXG37809 | ProteinID:KXG37809.1 |
| SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI00081AD8A4 | UniProt:A0A1B6QIT1 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr1:-:10278170..10279259
Molecular Weight (calculated)
25692.6 Da
IEP (calculated)
9.495
GRAVY (calculated)
-0.584
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEPASRRG DDTHMKLLCS HGGRFQPCGP DGEPRYVGGE TRVLVVPRAV SFRDLAARLA EMAAGGGKAA EVRAISIRHR LADDEGLEDV LVTVTCDEEV
101: AHMRDEYDRL RATRPAARFR LFVTTTSAGP KRATTTAGLP PLAPQSSMRR VQSEQAVAAR AQQKHRPTRR VHSALELAGG VHMQPSFHQH HHRHRRCCCC
201: SCQRRDRHGE TLLWIVFSPY FPTATDVNSK D
101: AHMRDEYDRL RATRPAARFR LFVTTTSAGP KRATTTAGLP PLAPQSSMRR VQSEQAVAAR AQQKHRPTRR VHSALELAGG VHMQPSFHQH HHRHRRCCCC
201: SCQRRDRHGE TLLWIVFSPY FPTATDVNSK D
001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
Arabidopsis Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.