CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021746_P001	Maize	plastid	88.52	90.6
Zm00001d006574_P001	Maize	plastid	84.69	88.53
TraesCS2A01G207800.1	Wheat	plastid	64.03	67.66
TraesCS2D01G214600.1	Wheat	plastid	64.29	67.56
HORVU2Hr1G041600.1	Barley	mitochondrion	51.53	66.89
TraesCS2B01G234400.1	Wheat	plastid	63.27	65.44
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	65.05	60.28
GSMUA_Achr4P33650_001	Banana	mitochondrion	29.08	36.77
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	25.77	35.31
Solyc02g079360.1.1	Tomato	nucleus	27.3	27.79
KRH41951	Soybean	nucleus	29.85	27.79
KRH49930	Soybean	nucleus	29.85	27.59
PGSC0003DMT400057688	Potato	nucleus	29.08	27.4
KXG37356	Sorghum	nucleus	24.23	27.38
CDX91230	Canola	nucleus	29.59	26.24
CDX97304	Canola	nucleus	29.59	26.13
Bra018513.1-P	Field mustard	nucleus	29.59	26.13
CDY62874	Canola	nucleus	25.77	25.44
CDY46377	Canola	nucleus	25.51	25.25
Bra029559.1-P	Field mustard	nucleus	24.49	24.3
AT4G05150.1	Thale cress	nucleus	28.83	23.69
EES09698	Sorghum	cytosol	13.78	22.88
OQU91169	Sorghum	cytosol	13.78	22.22
KXG37809	Sorghum	cytosol	11.99	20.35
EES00348	Sorghum	nucleus	31.12	18.4
EES07730	Sorghum	cytosol	25.51	17.67
OQU78054	Sorghum	cytosol	15.05	16.12

Protein Annotations

MapMan:35.2	UniProt:C5XAX5	EnsemblPlants:EER99518	ProteinID:EER99518	ProteinID:EER99518.2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0051753	GO:GO:0071669	GO:GO:0097502	InterPro:IPR000270	InterPro:PB1_dom	PFAM:PF00564
PANTHER:PTHR31066	PANTHER:PTHR31066:SF4	SMART:SM00666	EnsemblPlantsGene:SORBI_3002G336000	SUPFAM:SSF54277	UniParc:UPI00081AE675
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:70398079..70400457

Molecular Weight (calculated)

40847.6 Da

IEP (calculated)

6.157

GRAVY (calculated)

-0.369

Length

392 amino acids

Sequence
(BLAST)

001: MTSPSSHHPD SSSASSTPRA GVANGNGNGG NHHHHHLHPP PLPPAPAPTP AAPPAQAQAG HGGPLVRLMC SFGGRILPRP GDRQLRYVGG ETRIVSFPRA
101: AASFAALVAA LAKAAPALFA PGAPRPSLKY QLPQDDLDSL ISVTSDDDVD HLMDELDRIH DLSANVARPP RLRVFLFAPA PDAAFGSVLS GTAGEAAAST
201: DQWFVDALNA PAPPPIERGR SEASSIISEV PDYLFGLDTA SDEPSPGPAA ARAKSDAAET PRHHGDDEDD VPPSARQMPY VTEGASSWPA PPPPYMAQPV
301: YYFPVPPPVH YLDPSAQGGY MPRPVYHIVG SGGSDAPGGD LHAAGSVGSV YGVPHHMHAF PPMMYPPPRA VVYNYKSEGM PSLPPEGGAH SS

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.