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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97304 Canola nucleus 100.0 100.0
CDX91230 Canola nucleus 98.2 98.64
Bra029559.1-P Field mustard nucleus 74.1 83.29
AT4G05150.1 Thale cress nucleus 85.59 79.66
VIT_00s0203g00140.t01 Wine grape cytosol, nucleus, plastid 34.68 53.85
KRH41951 Soybean nucleus 46.85 49.41
KRH49930 Soybean nucleus 46.4 48.58
Solyc02g079360.1.1 Tomato nucleus 42.12 48.57
PGSC0003DMT400057688 Potato nucleus 44.37 47.36
GSMUA_Achr4P33650_001 Banana mitochondrion 26.8 38.39
Bra016197.1-P Field mustard mitochondrion 12.61 33.73
HORVU2Hr1G041600.1 Barley mitochondrion 22.3 32.78
TraesCS2A01G207800.1 Wheat plastid 26.8 32.08
TraesCS2D01G214600.1 Wheat plastid 26.58 31.64
TraesCS2B01G234400.1 Wheat plastid 26.13 30.61
EER99518 Sorghum plastid 26.13 29.59
Zm00001d006574_P001 Maize plastid 24.77 29.33
Zm00001d021746_P001 Maize plastid 25.23 29.24
Bra032936.1-P Field mustard plastid 11.26 27.93
Bra038608.1-P Field mustard nucleus 12.16 27.84
Bra025209.1-P Field mustard mitochondrion 11.26 27.62
Bra018071.1-P Field mustard plastid 11.04 26.78
Os07t0556300-01 Rice endoplasmic reticulum, vacuole 25.23 26.48
Bra010988.1-P Field mustard cytosol, nucleus, plasma membrane 14.86 25.38
Bra022508.1-P Field mustard nucleus 15.99 25.18
Bra000599.1-P Field mustard mitochondrion 14.64 24.53
Bra006344.1-P Field mustard plastid 18.47 23.1
Bra035855.1-P Field mustard cytosol 9.91 23.04
Bra031918.1-P Field mustard nucleus 21.17 19.83
Bra022297.1-P Field mustard nucleus 25.45 19.72
Bra022296.1-P Field mustard cytosol 25.9 19.43
Bra024295.1-P Field mustard nucleus 18.92 19.35
Bra008633.1-P Field mustard plastid 20.95 19.18
Bra017462.1-P Field mustard cytosol, plastid 27.7 19.16
Bra024899.1-P Field mustard nucleus, plastid 30.63 18.73
KXG37356 Sorghum nucleus 14.64 18.73
Bra009393.1-P Field mustard nucleus 18.92 17.72
Bra037596.1-P Field mustard nucleus 25.23 17.42
Protein Annotations
EnsemblPlants:Bra018513.1EnsemblPlants:Bra018513.1-PEnsemblPlantsGene:Bra018513Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR000270InterPro:PB1_domPANTHER:PTHR31066PANTHER:PTHR31066:SF4PFAM:PF00564
SEG:segSMART:SM00666SUPFAM:SSF54277UniParc:UPI000254811DUniProt:M4DPS2MapMan:35.2
Description
AT4G05150 (E=3e-189) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Coordinates
chrA05:+:8826898..8828823
Molecular Weight (calculated)
49148.4 Da
IEP (calculated)
5.865
GRAVY (calculated)
-0.770
Length
444 amino acids
Sequence
(BLAST)
001: MASTLQPEMD NDSMASSPRS EYDNQPRVRF MCTFGGRILP RPPDNQLSYV GGDNRMIAVH RNTSFASLLN KLAKLSGKSN ISVKYQLPNE DLDALISVST
101: DEDVENMMDE YDRVAQNQNP RSSRLRLFLF TNNIAGEDDN DSRASSISSL LDSSVNREQW FLDALNLGSS AVSNGGSGKG FERVRSEVSS IVSEVPDYLF
201: GLDTFDETAP PHELRDRDPR AKIRREVSTL SDPGSPRRDV PSPYGSTSSA PVMRSSTPEL QPVQTKPDSP EPVSTPKSDP QPEQVIQQSN LPVNPQWQYA
301: PGPQVHYQQP VYYVPSSVQP GNHMVQPGNH MIQQGNHMVQ QGNHMVQPVQ MPGQYVPQYH HLPMGYHHQP QTHRIPGPGP GLGQVYGGTA RPVMMAVDGV
401: NRPAYYDMNT PGPVQMYHNH PGMVVPGMEG QYRTETDSDP GRAS
Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)
001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS
Arabidopsis Description
AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.