Factsheet for Bra031918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra036832.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64430.1	Bra036832.1-P	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46804	Canola	nucleus	96.41	96.01
CDY31319	Canola	nucleus	55.06	93.55
Bra024295.1-P	Field mustard	nucleus	68.78	75.12
AT5G64430.1	Thale cress	nucleus	79.11	73.1
KRH57272	Soybean	cytosol	12.87	66.3
Bra009393.1-P	Field mustard	nucleus	59.49	59.49
KRH21700	Soybean	nucleus	41.35	44.55
KRH49860	Soybean	nucleus	44.3	44.4
KRH42038	Soybean	cytosol	44.09	43.91
KRH10652	Soybean	cytosol	40.72	43.27
VIT_03s0097g00600.t01	Wine grape	nucleus	42.62	43.25
PGSC0003DMT400008036	Potato	nucleus	43.25	41.75
Solyc01g106320.2.1	Tomato	extracellular	43.25	41.58
Bra032936.1-P	Field mustard	plastid	12.24	32.4
Bra025209.1-P	Field mustard	mitochondrion	11.81	30.94
Bra016197.1-P	Field mustard	mitochondrion	10.34	29.52
Bra038608.1-P	Field mustard	nucleus	11.81	28.87
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	24.89	28.5
Zm00001d051939_P001	Maize	cytosol	31.65	27.88
Bra018071.1-P	Field mustard	plastid	10.55	27.32
EES07730	Sorghum	cytosol	32.28	27.03
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.77	26.92
Bra000599.1-P	Field mustard	mitochondrion	14.98	26.79
TraesCS6A01G380500.1	Wheat	cytosol	29.96	26.69
Zm00001d018447_P001	Maize	extracellular	30.59	26.46
GSMUA_Achr1P05710_001	Banana	cytosol	27.0	26.28
TraesCS6B01G419500.1	Wheat	cytosol	27.0	25.96
Bra022508.1-P	Field mustard	nucleus	15.4	25.89
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	29.96	25.77
Bra035855.1-P	Field mustard	cytosol	10.34	25.65
TraesCS6D01G365200.1	Wheat	cytosol	26.37	25.56
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	15.61	24.92
Bra029559.1-P	Field mustard	nucleus	18.14	21.77
Bra018513.1-P	Field mustard	nucleus	19.83	21.17
Bra006344.1-P	Field mustard	plastid	15.61	20.85
Bra008633.1-P	Field mustard	plastid	18.78	18.35
Bra017462.1-P	Field mustard	cytosol, plastid	22.57	16.67
Bra024899.1-P	Field mustard	nucleus, plastid	25.32	16.53
Bra022296.1-P	Field mustard	cytosol	18.78	15.03
Bra022297.1-P	Field mustard	nucleus	18.14	15.01
Bra037596.1-P	Field mustard	nucleus	19.62	14.46

Protein Annotations

EnsemblPlants:Bra031918.1	EnsemblPlants:Bra031918.1-P	EnsemblPlantsGene:Bra031918	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF2	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000254671D	UniProt:M4ESY8	MapMan:35.2

Description

AT5G64430 (E=2e-154) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA02:-:27114975..27116399

Molecular Weight (calculated)

52008.1 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.708

Length

474 amino acids

Sequence
(BLAST)

001: MEKLSYNSYP DSTDSSPRSR EIDFDNPPPW DDHNHQSYKV RFMCSYGGKI QPRPHDNQLT YVNGETKILS VDRGIRFPVL ASKLSAVCGG VGDVLFKYQL
101: PGEDLDALIS VTNDDDLEHM MHEYDRLLRV SSKPARMRLF LFPVSSGGFG PEGSSHSDRD RFVEALNTFR NRSEPEKTVT GPVNSADFLF GTEKVVAPPP
201: PPAAPVVLEP QPPVIQPDHA AEMQNQMLEF QRMQVRDQEQ QQEAVYRRKS EDGLIFSPPY APPPPPQTAV PQNSTQAPPM NFWQGNHCNP GGVYPTTAPG
301: MGLPEQPVYM VPAPAPTLTP HPGTVYHAPQ QPQSVMRPIA PGQGNQSGYY PYREQHQPAY NVAQPQVGAR APPQQQQQPP PPFTSGPPPQ PQYSAVPPPR
401: QVVGVPDTTA YTQVNYAGGM GKQVYYTEAP PPQYHGGVGL PVNGMSEVRT GPDGKPVVMN MSPKVSSQSS DSAV

Best Arabidopsis Sequence Match ( AT5G64430.1 )
(BLAST)

001: MEKFSYNSYP DSTDSSPRSR EIEFDNPPPP WDDQNQNQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGE TKILSVDRGI RFPVLASKLS TVCGGGDGGG
101: GEVTFKYQLP GEDLDALISV TNDDDLEHMM HEYDRLLRLS SKPARMRLFL FPASSGFGSQ SSTQSDRDRF VEALNTVPRL SESEKSVTAP PNNADFLFGS
201: EKVAAPPPPP PAEVKLPVPV ALEPPLFNDP RVIQPDHVVN PMEIQRQMQE FQRMHIRDQE QQQQQEAVYR RKSNEDGLIE TGGGYFSPPY IQNPAPPPPQ
301: QTIPQTNPQA PPMTTFWQGN HNPGVVFPTT THGLGLPEQP VYMIPSPSPS PVYHAPPPPQ PQGVIRPILT GQVNQGGYYP QVQRVASDTY REPHQSPYNV
401: AQPLQAPIGT KAAQQQQPPP PQPFTSGPPP PQYTAVPPPR QVVGLPDTSA YTQVTYTGGM GKQVYYTEAP PPQYHGVGLP VTGMSELRTG PDGKLVAMNM
501: APKVSSQSSD SAV

Arabidopsis Description

At5g64430 [Source:UniProtKB/TrEMBL;Acc:Q9FGF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.