Factsheet for Bra038608.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41501	Canola	cytosol	95.88	98.41
CDX84387	Canola	nucleus	95.36	94.39
AT5G63130.2	Thale cress	nucleus	81.96	82.81
Bra035855.1-P	Field mustard	cytosol	76.8	78.01
Bra018071.1-P	Field mustard	plastid	58.76	62.3
KRH54323	Soybean	cytosol, nucleus, plastid	46.91	48.92
KRH63619	Soybean	plastid	47.42	47.42
VIT_17s0000g09190.t01	Wine grape	cytosol, nucleus, plastid	38.66	47.17
KRH03222	Soybean	cytosol	44.33	43.43
PGSC0003DMT400069641	Potato	mitochondrion	38.66	43.35
Bra032936.1-P	Field mustard	plastid	39.69	43.02
Bra016197.1-P	Field mustard	mitochondrion	36.6	42.77
PGSC0003DMT400046652	Potato	plastid	40.72	39.9
Solyc06g071750.2.1	Tomato	plastid	39.69	39.9
Bra025209.1-P	Field mustard	mitochondrion	37.11	39.78
Bra000599.1-P	Field mustard	mitochondrion	29.38	21.51
Bra022508.1-P	Field mustard	nucleus	30.41	20.92
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	25.77	19.23
Bra006344.1-P	Field mustard	plastid	23.71	12.96
Bra029559.1-P	Field mustard	nucleus	26.29	12.91
Bra024295.1-P	Field mustard	nucleus	27.84	12.44
Bra018513.1-P	Field mustard	nucleus	27.84	12.16
Bra031918.1-P	Field mustard	nucleus	28.87	11.81
Bra009393.1-P	Field mustard	nucleus	27.32	11.18
Bra008633.1-P	Field mustard	plastid	24.74	9.9
Bra017462.1-P	Field mustard	cytosol, plastid	31.44	9.5
Bra022297.1-P	Field mustard	nucleus	27.84	9.42
Bra022296.1-P	Field mustard	cytosol	28.35	9.29
Bra024899.1-P	Field mustard	nucleus, plastid	32.99	8.82
Bra037596.1-P	Field mustard	nucleus	26.29	7.93

Protein Annotations

EnsemblPlants:Bra038608.1	EnsemblPlants:Bra038608.1-P	EnsemblPlantsGene:Bra038608	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF10	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000253F244	UniProt:M4FBZ2	MapMan:35.2

Description

AT5G63130 (E=2e-068) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA06:+:14156585..14157281

Molecular Weight (calculated)

21565.5 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.545

Length

194 amino acids

Sequence
(BLAST)

001: MVAVDVNEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVHRSI SFEELVKKLF EFCGYSVDLR CQLPNGDLET LISVKSDEDL ANIVEEYDRV
101: SGAKIRAVLS PPRAHRQGSP SSSSSDRSPK SPFARSPFSV TPSPPNSPSS AYGRYLQSRY CLPPTDLGRR YIHGYGESYC YACRGHKDSR LIRH

Best Arabidopsis Sequence Match ( AT5G63130.1 )
(BLAST)

001: MVAVDYTEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVDRSI SFSELMKKLY EFCGYSVDLR CQLPNGDLET LISVKSEEEL AEIVEEYDRI
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH

Arabidopsis Description

At5g63130 [Source:UniProtKB/TrEMBL;Acc:Q9FML0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.